Vigna umbellata (ricebean): 124835834
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Entry
124835834 CDS
T09662
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124835834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vum03021
]
124835834
03036 Chromosome and associated proteins [BR:
vum03036
]
124835834
Transcription machinery [BR:
vum03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124835834
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124835834
PBAF complex
124835834
GBAF(ncBAF) complex
124835834
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Mesothelin
Motif
Other DBs
NCBI-GeneID:
124835834
NCBI-ProteinID:
XP_047166801
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MNNNNPPKNASTPSFFTNPAAPSIPMNHPSPHLLSQTQPQPQAGASHFHGHFQLSQPQIH
VLAQPHPVPPPQVHNNSNTNANVATPAPPKRANHKPPSRPPGSSNATQSSAFKTMELTVA
PPRKKRSFPDKLIPDKVAKLVPESAIYAKLLELETHVDSVLVRKKIDVQENLRNPRCVRR
TLRIYVYNTFSKQVKVEPGKIDVEELSWVLRMTGRVLEDGKDPVADGVLPKENPRFSAFF
KKITIYLDQGFYPDNHVVVWDSARSTAQRDGFEVKRKGDKEFTAVVRMSMNYSPDKFMVS
AQLARVLGVEFDSRSRIIAALWHYVKAKKLQSPNDPSFFMCDASLQRVFGEEKMKFSVAS
QKISQHLSPPQPIHLEHKIKLSGNCPAGATCYDVQVDVPLPLEKDMSSFLESTEKHKEID
AFDKLISDSIKKIHEHHRRRAFFLGFSQSPAEFINALIASQSKDLKLIAGDVSHSVENER
RSEFYNQPWVEDAVVRYLTRKNARSDAPGNI
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaataatccgccaaaaaatgcttcaacgccgtcgtttttcaccaacccggct
gcaccgtcaatccccatgaaccacccatcaccccaccttctctcacagacgcagcctcaa
ccgcaagctggtgcctctcacttccatggccattttcagctctcgcaaccgcaaatccac
gtcctcgcacagccacaccctgttcctcccccacaggtgcataacaattccaataccaat
gccaacgttgcaacacctgcgcctcccaagcgtgcaaatcacaaacccccttcacgccct
ccaggttcctccaacgccacccaatcctctgccttcaagaccatggaacttaccgtggcg
cctcctcggaaaaagagaagctttcccgataagctcattcccgacaaggtggccaagctt
gtgcccgagtctgctatttatgccaagttgcttgaacttgagacccacgtagattctgtt
ttggttaggaagaaaattgatgtgcaggagaatttgagaaaccctcgctgtgttaggaga
acgcttaggatttatgtgtataatacattttcgaaacaggtgaaagtggaacctgggaag
attgatgtggaggagctttcttgggttctcaggatgaccggaagggtgttggaagatggt
aaggatcctgtggcagatggagttttgcctaaagaaaatccaagattctcggctttcttc
aagaagattaccatttacttggatcagggtttctatccggataaccatgttgttgtgtgg
gatagtgcccgttcgactgcgcagcgcgatggttttgaggtgaagaggaaaggagataag
gaattcacggcggttgttagaatgtcaatgaattattcgcctgacaaatttatggtatcg
gctcagctggctagagtgttaggggttgagtttgactcccgctctaggatcattgctgct
ctttggcactatgtgaaggctaagaagttgcagagtcccaatgacccttcgttcttcatg
tgtgatgcttctctccaaagggtgtttggggaggagaagatgaaattttcggtggcttcg
cagaagatatcacagcatttgtcacctccgcagcctatacacctggagcataaaatcaag
ctttcgggaaattgtccagccggagctacgtgttacgatgtgcaggttgatgtgcctctt
ccactagagaaggatatgtcttcattcttggaaagcactgagaagcacaaagagattgat
gcttttgataaactgatatctgattccataaagaagatccatgaacatcataggagacgg
gcattctttctcggctttagtcagtccccagcggagtttattaatgctttgatagcttct
caaagcaaggatctgaagcttattgctggagatgtgagccatagtgttgagaatgaacgg
cgttctgaattctacaatcaaccatgggttgaggatgctgtcgttcgctacctgaccagg
aaaaatgctcgaagtgatgctcctggaaacatctga
DBGET
integrated database retrieval system
