Vigna umbellata (ricebean): 124836128
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Entry
124836128 CDS
T09662
Name
(RefSeq) pre-mRNA-processing factor 39-2 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vum03041
]
124836128
Spliceosome [BR:
vum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124836128
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_12
UTP6_C
TPR_MalT
TPR_7
NRDE-2
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
124836128
NCBI-ProteinID:
XP_047167166
LinkDB
All DBs
Position
Unknown
AA seq
828 aa
AA seq
DB search
MADSESVATEASAHSAAEAYASAGYAESGSNPTLEAGATADQPAGEGAQSTSTYGFGYSN
TGDVNAYTGDPNSVLQQSQFNATGDTKPAGGVPDANEASAGVGSTAAEPALASNYSSSVN
GGVVGSVTNGLENGNALENIDGSVDEKQLADGYGAALSAEEDRLWNIVRANSLDFSAWTS
LIEETEKVAEDNILKIRRVYDSFLAEFPLCYGYWKKYADHEARLGSIDKVVEVYERAVQG
VTYSVDIWLHYCIFAISTYGDPDTVRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQDWA
RLAIIYTRILENPNQQLDRYFSSFKELAGNRPLSELRTAEEAAVSVASEATAGQGAEGEV
HPDGAEKSPKSVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPL
NVGELENWHNYLDFLEREGDLSKIVKLYERCVIACANYPEYWIRYVLCMEASGNMDLANN
VLARATQVFVKRQPEIHLFSARFKEQNGDIEGARAAYQLVHTETSPGLLEAIIRHANMER
RLGKMEDAFSLYEQAIAIEKGKEHSQTLPMLFAQYSRFVYLASGNAEKARQILVEGLENV
LLSKPVLEALLHFEAIQPFQKRVDIDFLESWVCKFIMPNSESPSVASAIEREELSSIFLE
FLNLFGDVQSIKRAEDMHAKLFLPHRSMSELKKRHAEDFLASDKVKASRTYSAQSPAQSV
IGAYPNAQNQWTNYGVQPQTWPPVTQAQGQQWTAGYTQQASYGAYAGYGGNYANSQLPAS
VPPSTAYGAYPPSYPAQPAVPQQPYAQPVAAPAQQPAAVPQAYYGSYY
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggcagatagtgaatccgttgctaccgaagcatccgctcattccgctgctgaggcatat
gcttcggctggttatgccgagtctgggtcaaatcctactctcgaggcaggtgctactgct
gatcaaccggctggagaaggagctcagtccacttcaacgtatggatttggttattctaat
actggtgatgtgaatgcgtatactggggatccgaattctgttctacagcaatcccaattc
aatgctactggtgataccaagccagctggtggagtgccagatgctaacgaagcctctgct
ggggttggaagcactgctgctgagcctgctctggcttctaactacagttcatctgtcaac
ggtggtgtagtcggttcagtgacgaacggacttgaaaacggaaatgcattggaaaacatt
gacgggtcggttgatgaaaaacaactcgcagatggctacggagctgccttgtctgctgag
gaagatcgactgtggaatattgtaagagctaattctttagatttcagtgcctggacttcc
ttgattgaagagacagagaaggtagccgaggacaatattctgaagattcgaagagtttat
gattcctttctagcagaatttcccttgtgctacggttattggaagaaatatgctgaccat
gaggcacgacttggctctatagataaagttgttgaggtgtatgagcgtgctgttcaaggg
gttacatattcagtggacatttggttgcattattgcatatttgctataagcacgtatggg
gatcccgacactgttcgtaggcttttcgaacgaggattggcttatgttggaacagattat
ctttcttttcccctctgggataaatacattgaatatgagtacatgcagcaggactgggct
cgccttgccataatttacaccagaatattagagaatccaaatcaacaattagatcggtat
ttcagcagcttcaaggagttagctggaaaccgacctttgtcagagttacgaactgctgaa
gaagctgctgtaagtgttgcttcagaggctactgctggacaaggtgctgagggagaggtt
catcctgatggtgcagagaagtctcctaaatctgtaagtgctggcttaacagaagcagaa
gagttggagaagtatatcgccataagagaagagatctataaaaaagctaaagagttcgat
tctaagatcattggttttgaaacagccatccgaaggccctattttcacgtccggcctctc
aatgttggagagctcgaaaattggcacaactatctggactttttagaaagggaaggtgac
ttaagcaagattgtcaagttgtatgagaggtgtgtcattgcatgtgccaattatcctgag
tattggatacgctatgttttgtgtatggaagccagtggaaacatggatcttgcaaataat
gttcttgcccgagccacccaagtctttgttaagagacaaccggagatacatcttttttct
gcgcggtttaaggagcagaatggagatatagagggtgctagagctgcctatcagcttgtg
catactgaaacttcccctggtcttcttgaagcaataatcaggcatgccaatatggaacgc
cgattgggaaaaatggaggatgccttctccttgtatgaacaggccatagctattgagaaa
ggaaaagaacattcacaaacattgccgatgttgtttgctcagtattctcgatttgtttat
ttggcttctgggaatgcagagaaggcaagacagattttagttgaggggctggagaatgtt
ttgttgtcaaaaccagttctcgaggccttattgcattttgaggctattcaaccctttcaa
aagcgagttgatatcgactttctggagtcatgggtttgcaaattcataatgcctaactca
gagagtcctagtgtagctagtgcaattgagcgtgaggaactttctagtatttttctggag
tttttgaatctctttggagatgttcaatcaatcaagagagcagaggatatgcatgccaaa
ttgtttttgccacacagaagcatgtcagagttgaagaaacgtcatgctgaggatttctta
gcttcagacaaagttaaagcgtcaagaacttattctgctcaatcacctgcccaatccgtg
attggtgcgtatccaaatgcacaaaaccaatggactaattatggagtacaacctcaaact
tggcctccggttacacaagcacaggggcaacagtggactgctggctacacccagcaggct
tcttatggggcttatgctggatatggcggcaattatgcaaattctcaattgcccgcatca
gttccaccgagtactgcatacggggcctatcctccttcttatcctgcacagccggcggtt
cctcaacagccctatgcgcaacctgttgcagcccctgcacagcaacctgctgcagttcct
caagcctattacggtagttattactga
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integrated database retrieval system
