Vigna umbellata (ricebean): 124836443
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Entry
124836443 CDS
T09662
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vum03041
]
124836443
Spliceosome [BR:
vum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124836443
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_long
PPR_3
PPR_1
Suf
ARM_TT21_2nd
ARM_TT21_N
AEP1
DUF4522
Motif
Other DBs
NCBI-GeneID:
124836443
NCBI-ProteinID:
XP_047167562
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MPFPQTLTLSIFSTPNLTSHFTTSSMRSSFRSLTFSLSHHLTLPFLSSPRLLQLRLPQLR
RLAVTAPEQEALRSAELESRRLRGPEVEVGELSAVPEEWRRARVAWLCKELPAHKAGMLV
KILNAQRKWMTQEDAAYIIVHCLRIRENETAFKVYKWMMQRNWYRFDFALATKLADYLGK
ERKFSKCREVFDDIINQGRVPSESTFHILVVAYLSAPVQGCLDEACGIYNRMIQLGGYQP
RLSLHNSLFKAIVSNPGILSKHYLKQAEYIFHHMVTTRLDVQKDIYAGLIWLHSYQDSID
KERIAELREAMQCAGYEEDREVLLSILRICAREGEVEEAEKTWVKLLKFESDPPALAFVY
KMEAYSKVGMPMKSLEIFREMQSKLGKADVAAYNQIIEILCKAQESELAESIMADFVKSG
LKPLTPSYVHLLSMYYNLELYDKLEEALSQCLEKCRPNCATYTIYLDYLVKIGNIDKAQD
IFNRMNSDAFIGVNARSCNTILSGYLSSGNHMKAEKIYDFMCLKKYEIESPLMEKLDYIL
SLKRKVVKRPINLKLSKEQREILIGLLLGGLRIDSDDPRRNHIIRFDFDGNSNSHYVLKS
HIYRQFYEWLHPSCKPSDDSENVPDKFCTIVSSHFGFYADQFWANGEPTIPKLIHRWMSP
CVLAYWYMYGGHRNSSGDIFLKIKGSQEGVENIVKKFKAMSMDCKVKRKGRVFWIGILGS
HSTWFWKLVEPYMIEDRDFPEVGDETEKHYAMAAEEIKFNSDSGE
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgcccttccctcaaaccctaaccctatctatcttctccacccctaaccttacctctcac
ttcacaacttcctccatgcgttcttccttccgctctctcaccttctctctgtcgcatcac
ctcaccctccctttcctctcctcgccgcggcttctacagttgcggctgccacagttgcgg
cgtcttgccgtaacggcaccggagcaagaggctctgcggtcagcagaactggagtcgagg
cggctgcggggcccggaagtggaggtgggggaactgagcgcggtgccagaggaatggcga
agggcgagagtggcgtggctgtgcaaggagctgccagcgcacaaggcagggatgctggtt
aaaatactgaacgcgcagaggaagtggatgacgcaggaagatgccgcctacatcatcgtc
cactgcttgcgtattcgggagaacgagaccgccttcaaggtatacaagtggatgatgcaa
cgaaattggtatcggtttgattttgctcttgctaccaagctagcagattatttgggtaaa
gagcgaaagttttcaaagtgccgtgaagtatttgatgatattatcaatcaaggccgcgtt
cctagtgagtcaacattccatatattagtcgttgcatatcttagtgctcctgttcaaggc
tgtttagatgaagcatgcggcatttataatcgtatgattcagttgggtggttaccagccc
cgtcttagcttacataattcccttttcaaggctattgtaagcaatccagggatcttgtca
aagcattaccttaagcaagctgagtatatatttcatcatatggttacaactagacttgat
gtgcagaaagatatttatgcgggcctaatttggctgcacagctatcaggattccatagat
aaagaaaggatagcagaattgagggaagcaatgcaatgtgctggatatgaggaggataga
gaggtgctactatcaatcttgaggatatgtgcaagggaaggggaggtagaggaagctgag
aaaacttgggtcaaacttcttaagtttgaaagtgatcccccagctttggcttttgtgtat
aaaatggaagcatactcaaaagttggcatgcctatgaagtcattggaaatatttagagaa
atgcagtcaaaactcggaaaagcagatgttgcggcatataatcaaataatagagatatta
tgcaaagcacaagaatcagaattggcagagtcgataatggcagattttgtcaagagtggt
ctgaagcccctcacgccatcatatgtgcatttactaagcatgtactacaatttggagtta
tatgataaattagaagaggcattatcccagtgcctggaaaaatgtcgtcctaactgtgct
acatacactatatatctggattatttggtgaaaattggtaatattgacaaggctcaggat
atatttaaccgaatgaacagtgatgcctttattggtgttaatgctcgatcatgtaacacc
atcttaagtggatacctttcatcaggaaatcacatgaaagctgagaagatctacgatttt
atgtgtctaaaaaagtatgaaattgaatccccattaatggaaaagcttgattatatcctt
agcttgaaaaggaaagttgttaaaagaccaataaacctgaagttgagcaaagagcagaga
gaaatcttgattgggttgcttttaggtggtttgcggattgattctgatgatccaaggagg
aatcacattattcgctttgattttgatggcaattcaaacagtcattatgtcctcaagagt
catatatatcgccagttttatgagtggctgcatccttcttgtaagccaagtgatgacagt
gagaatgtaccagataagttttgtaccattgtaagctctcattttggcttttatgcagat
cagttttgggcaaatggtgaacctaccattccaaaactaatccataggtggatgtcacca
tgtgttctggcatactggtacatgtatggtgggcatcgaaattcatcaggggatatattt
ctgaaaatcaagggaagccaggaaggtgtagagaacattgtcaaaaagtttaaagccatg
tccatggattgtaaagtcaagagaaaaggaagggtattttggattggtattttgggaagc
cattcaacctggttctggaaattggttgagccatatatgattgaagatagagattttcct
gaagtaggtgatgaaacggagaaacattatgcaatggcagctgaagaaattaaattcaat
agtgattcaggcgaataa
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