Vigna umbellata (ricebean): 124836689
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Entry
124836689 CDS
T09662
Name
(RefSeq) vacuolar protein sorting-associated protein 36-like
KO
K12190
ESCRT-II complex subunit VPS36
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124836689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vum04131
]
124836689
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vum04147
]
124836689
Membrane trafficking [BR:
vum04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
124836689
Exosome [BR:
vum04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124836689
Exosomal proteins of colorectal cancer cells
124836689
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
K_channel_TID
MKT1_C
C7_FIM2_N
Motif
Other DBs
NCBI-GeneID:
124836689
NCBI-ProteinID:
XP_047167819
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MAGNCLPPVNITGSGRPVLEPNEIECFFLSGVDLLCEDDPSTSFPHLKSGLLILTTYRLL
WLPDSAASGGGAAGAVPLAAISHIFSVKKSLRSVFSSPRVRFQVSLSPEGRVEAVGSRSV
VVTVVVRGKGDCDAFLAKFWENWRARAWEEAGSGSSNAAAATATAETATTSSSGGIYSSD
GTVRMVGVSGILRKEQEMWESTDRSLQEAFQDLNALMSKAKEMVMLAEKMRLKLLSGSNS
QANATNDEEMGSKEEMQDWLLSVGIISPVTKESAGALYHQQLSRQLADFVKTPLEKAGGI
INLIDIYCLFNRARGTELISPDDLLQACSLWEKFDVQVVLRKFDSGVMVIQTKSHSDEEV
FNKVKMLVMKPDALRSGISASDAARTLGVAPAMAKEHLLSAESKGLLCRDISPDGFRFYI
NLFPEIDRDDIHLVKDREIYALWVQANHSHA
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggccggaaactgcttgccgccggtcaatatcaccggaagtggccggccggtgctcgaa
ccgaacgaaatcgagtgcttcttcctctccggtgttgatcttctctgcgaagacgacccc
agcacttccttcccccacctcaaatccggccttctaatcctcaccacctaccgcctcctc
tggctcccggattccgcagcctcaggcggtggagcagccggcgcagtccccctcgccgcc
atctcccacattttctccgtcaagaagtccctccgttcagtgttctcctcgccgcgggtc
cggttccaagtgtcactttcgccggaggggcgtgtcgaggcggtgggatcgcgatcggtg
gtggtgactgtggtggtgagggggaagggggactgcgacgcgtttctggccaagttttgg
gaaaattggcgcgccagagcgtgggaggaggcaggtagtgggtctagtaatgcggcggcg
gcgacggcgacggcggaaacggctacgacatcgtcatcaggaggaatttattcgagtgac
gggacggtgaggatggtaggagtgtccggaatactgagaaaggagcaggaaatgtgggag
agtactgatagaagcttgcaggaggcttttcaggatttgaatgctctcatgagtaaggct
aaagagatggtgatgctagctgagaaaatgaggctaaaacttttgtccggctcaaattct
caagccaatgcaactaacgatgaagagatgggttcaaaggaagagatgcaagattggtta
ttgagtgttggtattatatccccagttaccaaagagtctgcaggtgctttgtatcatcaa
caactttctcgtcagttggcagattttgttaaaactccacttgagaaagctgggggaatt
atcaatcttattgatatatattgcttattcaatcgggctcgtggcacagaattgatctca
cccgatgatttgttgcaagcatgttctctgtgggagaagtttgatgtacaggtggttctg
cgaaagttcgatagtggagtcatggtaatacaaactaagtctcatagtgatgaggaggtt
ttcaataaagtcaagatgcttgtaatgaaacctgatgctcttcgatctgggataagtgct
agtgatgctgcaaggacactaggggttgccccagcaatggcaaaggagcatctcttatct
gctgagagcaaaggtttactgtgcagagatataagtcccgatggatttcgcttctatatt
aacttgttccctgaaattgatcgagatgatatacatttagtaaaagatcgggaaatttat
gccttgtgggtacaggctaaccatagtcatgcttaa
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