KEGG   Vigna umbellata (ricebean): 124836830
Entry
124836830         CDS       T09662                                 
Name
(RefSeq) DNA repair protein RAD5A
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
vum  Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:vum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vum03400]
    124836830
DNA repair and recombination proteins [BR:vum03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    124836830
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4 zf-C3HC4_3 zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zf-RING_5 DEAD Prok-RING_4 ResIII RING_XB3-XBAT31 zf-C3HC4_4 zf-RING_4 UBA_Rad5 zf-ANAPC11 DUF2789 zf-P11 GIP1_N zf-RING_11 zf-Nse
Other DBs
NCBI-GeneID: 124836830
NCBI-ProteinID: XP_047168024
LinkDB
Position
Unknown
AA seq 999 aa
MGSKVSDHHLSTVRSIVGSEFSDMEIIRALHMAKNDVNAAINIILDTHTAPRFNPTRLNN
QLSVSPPKPSPSTPIVTKPSFSEQRIDNNSDDWWLVNCGEMTGLSTCKGRSINFGETVIF
KFPTKKLSSPSTGKGFGRAAACSEIVRFSTEQAGEIGRIPKEWARCLLPLVRDHKVRIEG
NCKFAPQVLGIMDSIILSVSVFINSSMFAKHHQVSLKDAANSTDESVFHPLPTLFRLLGL
NPFKEAELTPGDFYSNKRPLSEKVTLPRAKFEHPSQNGNENDNEESISEIEVENIVGVGS
SEELEEMDPPANLQCNLRPYQKQALYWMIQMEKGKCMDETATTLHPCWEAYHLADKRELI
IYLNAFSGEATIEFPSTLQMARGGILADAMGLGKTIMTISLLVAHSGKGESVGNQPIAKS
FTEVGEVSDNVHTFSNIPKKATKFSGFDKPTKQMNSLTSGGNLIICPMTLLGQWKAEIET
HVHHGSLSLYVHYGQSRPKDAKSLAQNDVVITTYGILASEFSSENADDNGGLFSIRWFRV
VLDEAHTIKSSKSQVSVAAAALIADRRWCLTGTPIQNSLEDIYSLLRFLRIEPWGHWAWW
NKLIQKPFEGGDERGLKLVQSILKPIMLRRTKHSTDREGKPILVLPPADMQVIYCEQTEA
EKDFYGALFKRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQDFAD
LNKLAKRFLRGTYNASDGEVKEAPSRAYVQEVVEELRKGEQGECPICLEAFEDAVLTPCA
HRLCRECLLASLRNATSGPCPVCRKAVNRQDLITAPTENRFQVDIEKNWVESCKVTALLN
ELENLRSSGTKSIVFSQWTAFLDLLQIPFVRNNISFVRLDGTLNLQQREKVIKQFSEDST
TLVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKKVAIKRFIVKG
TVEERMEAVQARKQRMISGALTDQEVRSARIEELKMLFT
NT seq 3000 nt   +upstreamnt  +downstreamnt
atgggaagtaaggtcagcgaccaccacctgtccaccgtgagatccatcgtgggttcagaa
ttctccgacatggaaatcatcagagccctccacatggccaaaaacgacgtcaatgcggcc
atcaacatcatcttggacactcacaccgccccaagattcaatcccacccgcctcaataat
caactttcagtctctcctccaaaaccctccccttccactcctatcgtcaccaagcctagc
ttcagtgaacaacgcattgataataacagtgatgattggtggttggtgaattgcggtgaa
atgacgggtttgtccacgtgtaaagggaggagtataaatttcggtgagactgtgattttc
aagtttccgacaaagaaattatcctccccctctacaggaaaggggtttggaagggctgcg
gcgtgttcggagatagttcggttttctactgaacaagctggggagattggtagaatacca
aaggaatgggctcggtgtcttttgcctctcgtgcgagatcataaggttaggattgagggg
aactgtaaatttgctcctcaagttttgggcatcatggactctattattttgtcagtaagt
gtatttatcaatagttcaatgtttgcaaagcatcaccaggtttctctcaaggatgctgcc
aactcgacggatgaatccgtgtttcatccgctgccaacactgtttcggttgctgggttta
aacccttttaaagaggcagagttaactccaggtgatttctattccaacaagcgtcctctc
agtgaaaaggtaacattaccacgtgccaagtttgagcatccttctcaaaatggcaatgaa
aacgacaatgaggaatctatttctgaaattgaggttgagaatattgttggtgttggatca
agtgaagagttagaggaaatggacccccctgctaatcttcagtgcaatctacgaccttat
caaaagcaggcactttattggatgatccagatggagaagggaaaatgcatggatgagact
gcaacaaccctccatccatgttgggaggcatatcaccttgctgacaagagggagcttatc
atttacttgaatgcattttctggtgaagctacaatagaatttcctagcacccttcaaatg
gccagaggaggaattttggcagatgctatggggcttggaaagaccatcatgaccatatcc
cttctagttgcccattcaggaaagggtgaatcagtaggcaatcaacccatagccaagtcc
tttactgaagttggtgaagttagtgataatgtgcacactttttcaaacatacccaagaaa
gcaaccaaattttcgggttttgataagccaacaaagcaaatgaactctctaacaagtggt
ggcaacttgataatatgtccgatgactcttcttgggcaatggaaggctgagattgaaact
cacgtgcaccatggatctctgtctctatatgttcactacggacaaagtaggccaaaagat
gcaaaaagtctcgctcagaatgatgttgtaattactacatatggaattttggcctctgaa
ttttccagtgagaatgcagatgataatggtggactcttctcaattcggtggtttagagtt
gttcttgatgaagcacataccataaaatcttctaagagccaagtttctgttgcagctgct
gctctaattgctgacagacgttggtgtctaacaggcaccccaattcagaacagccttgag
gatatttacagtcttctgcggtttctgagaatagagccatggggtcattgggcctggtgg
aacaaacttattcagaaaccatttgagggtggtgatgaaagagggctcaagttagttcaa
tcaattttgaagccaattatgttgaggagaactaaacacagtacagatcgagagggcaag
cccattttagttctgcctccagctgatatgcaggtaatttactgtgaacagacagaagct
gaaaaggacttttatggagctctattcaaaagatctaaggtaaagtttgatcagtttgtt
gagcaaggacgtgttcttcataattacgcttcaatattggagttacttctacgtcttcgg
caatgttgtgatcatccatttcttgtaatgagtcgaggtgatactcaagatttcgcggat
ctaaacaaactagctaaacgcttccttagaggaacatataatgcttcggatggtgaagta
aaagaggcaccttcacgggcttatgttcaagaagtcgtggaggagctacgtaaaggggag
caaggagaatgtccaatatgccttgaagcatttgaagatgcagtgttgaccccttgcgct
caccgcttatgcagggaatgcctcttggcaagtttgcgaaatgctacttctggcccatgt
cctgtttgtaggaaagcagtcaacaggcaggatctaatcactgcccctactgagaatcgg
tttcaggtggatattgagaagaactgggtagagtcatgcaaggtaactgctcttttgaat
gaacttgaaaatcttcgctcatcaggcaccaaaagcattgttttcagccagtggactgct
tttctggacctcttgcagatccccttcgttcggaataacatttcatttgttcgtcttgat
ggaactctgaatctgcagcagcgggagaaagtaatcaagcaattttcagaggacagcacg
actctggtgttgttaatgtcactaaaagctggtggagtgggtataaatctaactgcagct
tctaatgcttttgtcatggacccatggtggaatccagctgttgaggaacaagctgttatg
cgtattcatcgcattggacaaacaaagaaggtggccattaaacggtttattgtgaagggg
accgtcgaggagagaatggaagcagtacaagcacgtaaacaacgaatgatttctggtgcc
ttgactgatcaagaggttcgaagtgcgcgcattgaggagttaaagatgctttttacttag

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