Vigna umbellata (ricebean): 124837158
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Entry
124837158 CDS
T09662
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum00040
Pentose and glucuronate interconversions
vum01100
Metabolic pathways
Module
vum_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124837158
Enzymes [BR:
vum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
124837158
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
124837158
NCBI-ProteinID:
XP_047168411
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All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MEFLFRVLIILSVLAPGLSSTTTTFNVLKYGAVGDGQTNDSPAFLKAWKDVCQSKSHISQ
LIIPAKRTFMLKPTTFSGPCKSNYTYIQLSGNIVAPKTKPEYSGFHTNTWLGFSFIDGLI
ISGKGSIDGRGSIWWQQPCLGNSQPGTTCRPPTAVTFNRCNRLQLKGYTSINPARSHMTL
TSCQKGTLSFLRLVAPGNSPNTDGIDISGSKDIKVLNSFIATGDDCIAISAGSSKIRITG
ITCGPGHGISIGSLGARGETDIVEDVHVENCTLTETLTGVRIKTWQGGAGFARRISFEKI
KFVRANNPIIIDQFYCPHRSDCQNKTESIKVSDITYKGIVGTSLTDKAINLSCDENVGCS
NIVLDHVYITSAVPGQKVFSFCHNAHGTATHTKPSVKCLLK
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggagtttttgttcagagtgttgatcattctgagtgttcttgcacctggattgagcagc
acaacaactactttcaatgttttgaaatatggagcagtcggagatggacaaaccaacgat
tctccagcctttctgaaggcatggaaagacgtttgtcagagcaagtcacacatatctcag
ctcatcataccagcaaaacgaacattcatgctgaagcctactacattcagtggtccatgc
aaatccaattacacctacattcagctttcagggaacattgttgcaccaaaaacaaaaccg
gaatattctggattccacacgaatacatggcttggcttctcattcatcgatggtttaatt
ataagtgggaaagggtccattgatggtcgaggctctatctggtggcaacaaccttgctta
ggaaattcacaacctgggacaacctgccgtccaccaacagcagtaacattcaatagatgc
aatcgccttcaactgaaagggtatacaagtattaatcctgcaagaagtcacatgactcta
acaagctgccagaaaggcaccctctctttcctgcgtctagttgctcctggaaatagccct
aataccgatggcattgatatttctggctctaaagacattaaagtacttaattcttttatt
gcaacaggtgatgattgcattgctattagtgctggatcctctaagatcagaataactggt
ataacatgtggtccaggccatggtatcagcattggatcattgggagcacgtggagagacc
gacattgtcgaggacgtgcatgtggagaattgtactttgactgaaacattaactggagta
agaatcaagacatggcagggtggtgctggatttgccaggaggatctcgtttgaaaagatt
aagtttgttcgagccaataaccccattatcattgaccagttttattgccctcatagatcg
gactgccaaaacaagactgaatcaatcaaggtaagtgatataacttacaaagggattgtt
ggaacatcattgacggacaaagcaatcaacttgagctgtgatgaaaacgtgggatgctcc
aacattgtgcttgatcatgtttacataacttctgcagttccagggcagaaagttttctcc
ttttgccataatgcacatggaacagccacccacaccaaaccatccgtgaagtgtttgctg
aagtag
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