KEGG   Vigna umbellata (ricebean): 124837330
Entry
124837330         CDS       T09662                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair endonuclease UVH1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
vum  Vigna umbellata (ricebean)
Pathway
vum03420  Nucleotide excision repair
vum03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:vum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    124837330
   03460 Fanconi anemia pathway
    124837330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vum03032]
    124837330
   03400 DNA repair and recombination proteins [BR:vum03400]
    124837330
DNA replication proteins [BR:vum03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    124837330
DNA repair and recombination proteins [BR:vum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     124837330
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 124837330
NCBI-ProteinID: XP_047168618
LinkDB
Position
Unknown
AA seq 982 aa
MVQFHEHIITELLEDSNGGLVVLSSGLSLSKLVSSLLILHSSSEGTLLLLSPSSTSLKSK
ITFHLKTLNPQFNQIPAEVTADLPAHHRHALYSSGNAFFITPRILIVDLLTNKLPTSKIA
GILLLNAHSLSETSTEAFIVRIFRSFNRSAYVRAFSDKPHAMVSGFAKAERTMKCLHVRK
LHLWPRFQVYVSQELERDPPEVVDIRVPMSKYMVGIQKAIIEVMDACLKEMRKTNKVDVE
DLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYL
DTLRVSESFRSVWIFAEASYKIFDYAKKRVFHLVRSDGLKFNELSKGVKNKKRKSKGDGK
DIEEVDGTSHSTLNSGLVLEEVLEEAPKWKVLREVLEEVEEERQKAGMLGEEIFTEGEDT
DNGIVLVACKDEMSCLQLEECITGSPEKVMREEWKKYLLNKVQLRDIVNKKKKPKDPKPK
GFGILDGVTPITPAQNAETTSISKQEHDALLAAASKLRNVSENDNAKDAPQPNIGXQGSG
KRKRKVGIRKVPVVLDGVGVQNNDKEESVSDKIGMSDSKNEVNEDETNTVSAGRFSSEGT
SVENIVLRKHSNPNVAARTGKPLPPVHFYALESDQPILDILKPSIVIVYHPDMAFVREIE
VYKTENSSKRLKVYFLFYEASTEVQKFEASIRRENGAFESLIRQKSMMMIPVDQSGHSLG
LNSTLESDLNTPQNSVTRKAGGRKEADKEMQVIVDMREFMSSLPNVLHQKGMRIIPVTLE
VGDYILSPLICVERKSIQDLFMSFTSGRLYHQVETMVRYYRIPVLLIEFSQDKSFSFQSA
SDIGDDVTPNSIISKLSLLALHFPRLRIIWSRSLHATAEIFASLKANQDEPDETKAIRVG
VPSEEGIVENDVRAENYNTSAVEFLRRLPGVTDSNYRAIMDGCKSLAELALLPVERLAEL
MGGHKAARTLRDFLDAKYPTLL
NT seq 2949 nt   +upstreamnt  +downstreamnt
atggttcaatttcacgaacacatcatcacagagcttctagaagattccaatggcggtctc
gtggttctctcgtccggcctttctctctctaaactcgtctcgtctctccttattctacac
tcctcatccgagggaacgctccttcttctctctccttcctccacttcactcaaatccaaa
atcaccttccacctcaaaaccctaaacccacaattcaaccaaatccccgccgaagtcacc
gccgacctccccgcgcaccaccgccacgcgctttactcctccggcaatgcattcttcatc
acgccgcgcatcctaatcgttgacctcttgaccaacaagttaccgacctccaaaatcgcc
gggatcctcctccttaacgcgcactcgctctccgagacctccaccgaagcgttcattgtt
cggattttccgttcgttcaaccgcagcgcgtatgtgcgcgcgttctccgacaagccgcac
gcgatggtgtcggggttcgcaaaggcggagcggacgatgaagtgtctgcacgtgcggaag
cttcacctgtggccgcggtttcaggtttacgtgtctcaggagctggagagggacccgccg
gaggtggtggacataagggtgccgatgagcaagtacatggtgggaattcagaaggccatt
attgaggtcatggatgcttgtttgaaagagatgaggaagacgaacaaggtcgacgtggag
gatttgacggtggagaatgggttgtttaagtcttttgatgagattgtgaggcgacagttg
gatccaatttggcacactttagggaagaagaccaagcagcttgtctcagaccttaagaca
ttgaggaaactgttggattatctagtcaggtatgatgcagtaacttacttgaaatatctg
gatacattgagagtgtcagagagttttcggtctgtttggatattcgcagaggcaagctat
aagatatttgattatgcaaagaagcgtgtttttcatcttgtgagatcagatggcttgaaa
tttaatgagttgagtaagggtgtcaagaacaaaaagagaaaaagtaagggtgatggaaaa
gacattgaagaagttgatggtacttcgcactctactttgaattccggcttagttttggag
gaagtcttggaagaagcaccaaagtggaaggtcttacgtgaggttcttgaggaagtagaa
gaggaaagacaaaaggctggtatgttgggggaagaaatattcactgaaggtgaagacacc
gataatggcattgtactagtggcatgtaaagatgaaatgtcatgcttgcaacttgaagaa
tgcatcaccggcagtccagaaaaggtcatgcgtgaagaatggaagaagtacttactaaac
aaagtacagcttcgtgacatagtgaacaagaaaaagaagcctaaggatcccaaacccaaa
ggttttgggattcttgatggagttactcccataacacctgctcagaatgcagaaaccacc
agcattagtaagcaggaacatgatgcacttttggcagctgcctcaaaactaagaaatgtt
tctgaaaatgacaatgctaaggatgctccacagcctaatattggttgacagggaagtggt
aaaagaaagagaaaagtggggattagaaaggtcccggttgttcttgatggcgtgggagtt
cagaacaatgataaagaggaatcagtgagtgataaaattgggatgtctgattcaaaaaat
gaagtcaacgaagatgagactaatactgttagtgctggtagattttcttctgaagggaca
tctgtggaaaacatagttcttcggaagcattctaatcctaatgttgcagcaagaactggg
aagccacttccaccagtgcacttttatgcactagaaagtgatcagcctatactggatata
ttaaagccctcaatagtaattgtttaccatccagacatggcctttgtcagggaaatcgaa
gtctacaaaactgagaattcctcaaaaaggttgaaagtgtattttcttttctatgaagct
tcaactgaggttcagaagtttgaggcaagtatacgtagagagaacggagcatttgaatct
ttgattaggcaaaaatctatgatgatgattccagttgaccagagtgggcactctttagga
ttgaattctactttagaatcagatttaaatactcctcaaaactcagtaaccagaaaagca
ggtgggagaaaggaggctgataaagaaatgcaggttattgtggacatgcgggagttcatg
agcagccttccaaatgttcttcatcagaagggaatgcgcatcatcccagtgaccctagaa
gttggtgactatatcttatcaccgttaatttgtgtggaaagaaaaagtattcaagatctc
tttatgagcttcacatcaggtcgtctataccaccaggtcgagacaatggtacggtattac
agaatacctgtactgttgattgagttttcacaggataagagcttttcattccagtctgct
agtgatattggtgatgatgtgacaccaaatagcattatatcaaagttatctctgcttgct
ttacacttccccaggctgcggataatctggtctcgaagtttgcatgctactgctgaaata
tttgcttcacttaaggcaaatcaagacgagccagatgaaacaaaagcaatcagagtgggt
gttccctcagaagaaggaattgtggaaaatgatgtgagggctgaaaattacaatacatcg
gctgtggagtttctaagacgacttccaggtgttacagactcaaactacagggccataatg
gatgggtgtaagagcttggcagaacttgcacttcttcctgtggagaggctagcggaatta
atgggtggtcataaagctgctcggactcttagagactttctagatgctaaatacccaact
ttgttgtga

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