KEGG   Vigna umbellata (ricebean): 124837441
Entry
124837441         CDS       T09662                                 
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
vum  Vigna umbellata (ricebean)
Pathway
vum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124837441
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vum03041]
    124837441
Spliceosome [BR:vum03041]
 Complex C
  Other components
   Step II factors
    124837441
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_EML Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_DCAF4 WD_LRWD1 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_NWD2_C Beta-prop_Vps41 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 124837441
NCBI-ProteinID: XP_047168757
LinkDB
Position
Unknown
AA seq 583 aa
MDLLHQYSDDQNDDEPDSPSQNPSSPPRLLPGRTGAPKVDDTMLALTVSSSASALSRPID
PTQHLVGFNPSYDQLWAPIQGPAHPYAKDGIAQGMRNHKLGFVEDASIEPFLFDEQYNTF
HKFGYAADPSANNYVGDLDALRSNNAVSVYNIPRHQQKKRKTEAKDKKISDQNDEEDREE
EDGEEEIENPASEAWLLKNKKSPWAGKKEGLQGELTEEQKKYAEEYAKKKGEEKSGFGGE
KAEVVKDKSTFHGKEERDYQGRSWIAPPKDAKASNDHCYIPKRLVHTWSGHTKGVSAIRF
FPKYGHLILSASMDTKIKIWDVFNSGKCMRTYMGHSKAVRDICFSNDGTKFLSAGYDKNI
KYWDTETGQVISTFATGKIPYVVKLNPDEDKQNVLLAGMSDKKIVQWDMNTGQITQEYDQ
HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNANWL
AAQSLDNQILIYSTREKFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD
WKSCKVFRTLKCHEGVCIGSEWHPLEQSKVATCGWDGMIKYWD
NT seq 1752 nt   +upstreamnt  +downstreamnt
atggatcttcttcaccaatactccgacgaccaaaacgacgacgaaccagactccccgtcc
caaaaccctagctctccgccgcgccttctcccgggccgtaccggggcgcccaaggtggac
gacaccatgctggccctcaccgtctcctcatccgcctcggccctttccaggcccatcgac
ccgactcagcacctggtgggcttcaacccctcctacgaccagctctgggcccccatccag
ggcccggcccacccttacgcgaaggacggcatcgctcagggcatgcgcaaccacaagctc
ggcttcgtggaggacgcctccatcgagccctttctcttcgacgagcagtacaacaccttc
cacaagttcggctatgccgccgacccctccgccaacaactacgtcggcgacctcgacgca
ctccgctccaacaacgccgtctccgtctacaacatcccccgccaccagcagaagaagcgc
aaaaccgaggcgaaggacaagaaaatatccgaccaaaacgatgaggaggaccgcgaggag
gaggacggagaagaagagatcgaaaacccggcctccgaggcgtggctgctgaagaacaag
aagagcccctgggcggggaagaaggaagggttgcagggagagttgacggaggaacagaag
aagtacgcggaggagtatgcgaagaagaaaggagaagagaagagcgggtttggaggggaa
aaagccgaggttgttaaagataagagtacctttcatgggaaagaggagagggattaccag
ggtaggtcttggattgcgcctcctaaggatgctaaggctagtaatgatcattgctatatt
cctaagagattggttcatacttggagtggacacaccaaaggggtttcagctattcggttt
ttccctaagtatggccatttgattctctctgccagcatggataccaagattaagatttgg
gatgttttcaactctggcaagtgtatgaggacttacatgggacattcgaaagctgtcagg
gatatttgtttcagcaatgatgggaccaagtttttgagtgctggctatgacaagaatatc
aagtattgggatactgagacggggcaggtgatatccactttcgccactgggaaaattccc
tatgtcgtgaagcttaatccggatgaggacaagcagaatgttttgttggctggaatgagt
gataagaagattgttcagtgggatatgaataccgggcagataacccaggagtatgatcag
catctgggggctgtgaataccatcacctttgttgataacaacaggagatttgttacttct
agtgatgacaagtccctcagggtctgggaatttggtattcctgtggtgataaagtatatt
agtgagccccacatgcactccatgccttccatttcgcttcacccgaatgctaattggctt
gccgcacagagcttggataaccagatacttatttatagcacaagggagaagttccaactt
aacaagaagaagaggtttgcaggacatattgtggcgggatatgcctgtcaggtcaatttt
tctccggatgggcgatttgtcatgtcaggggatggggaggggaagtgttggttctgggac
tggaagagctgcaaggtcttcagaactctcaagtgtcatgaaggggtttgcattggcagt
gagtggcatcccttggaacagagcaaggtagcaacgtgtggctgggatgggatgataaag
tactgggactag

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