Vigna umbellata (ricebean): 124837441
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Entry
124837441 CDS
T09662
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124837441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vum03041
]
124837441
Spliceosome [BR:
vum03041
]
Complex C
Other components
Step II factors
124837441
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
WD_LRWD1
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_Vps41
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
124837441
NCBI-ProteinID:
XP_047168757
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MDLLHQYSDDQNDDEPDSPSQNPSSPPRLLPGRTGAPKVDDTMLALTVSSSASALSRPID
PTQHLVGFNPSYDQLWAPIQGPAHPYAKDGIAQGMRNHKLGFVEDASIEPFLFDEQYNTF
HKFGYAADPSANNYVGDLDALRSNNAVSVYNIPRHQQKKRKTEAKDKKISDQNDEEDREE
EDGEEEIENPASEAWLLKNKKSPWAGKKEGLQGELTEEQKKYAEEYAKKKGEEKSGFGGE
KAEVVKDKSTFHGKEERDYQGRSWIAPPKDAKASNDHCYIPKRLVHTWSGHTKGVSAIRF
FPKYGHLILSASMDTKIKIWDVFNSGKCMRTYMGHSKAVRDICFSNDGTKFLSAGYDKNI
KYWDTETGQVISTFATGKIPYVVKLNPDEDKQNVLLAGMSDKKIVQWDMNTGQITQEYDQ
HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNANWL
AAQSLDNQILIYSTREKFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD
WKSCKVFRTLKCHEGVCIGSEWHPLEQSKVATCGWDGMIKYWD
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggatcttcttcaccaatactccgacgaccaaaacgacgacgaaccagactccccgtcc
caaaaccctagctctccgccgcgccttctcccgggccgtaccggggcgcccaaggtggac
gacaccatgctggccctcaccgtctcctcatccgcctcggccctttccaggcccatcgac
ccgactcagcacctggtgggcttcaacccctcctacgaccagctctgggcccccatccag
ggcccggcccacccttacgcgaaggacggcatcgctcagggcatgcgcaaccacaagctc
ggcttcgtggaggacgcctccatcgagccctttctcttcgacgagcagtacaacaccttc
cacaagttcggctatgccgccgacccctccgccaacaactacgtcggcgacctcgacgca
ctccgctccaacaacgccgtctccgtctacaacatcccccgccaccagcagaagaagcgc
aaaaccgaggcgaaggacaagaaaatatccgaccaaaacgatgaggaggaccgcgaggag
gaggacggagaagaagagatcgaaaacccggcctccgaggcgtggctgctgaagaacaag
aagagcccctgggcggggaagaaggaagggttgcagggagagttgacggaggaacagaag
aagtacgcggaggagtatgcgaagaagaaaggagaagagaagagcgggtttggaggggaa
aaagccgaggttgttaaagataagagtacctttcatgggaaagaggagagggattaccag
ggtaggtcttggattgcgcctcctaaggatgctaaggctagtaatgatcattgctatatt
cctaagagattggttcatacttggagtggacacaccaaaggggtttcagctattcggttt
ttccctaagtatggccatttgattctctctgccagcatggataccaagattaagatttgg
gatgttttcaactctggcaagtgtatgaggacttacatgggacattcgaaagctgtcagg
gatatttgtttcagcaatgatgggaccaagtttttgagtgctggctatgacaagaatatc
aagtattgggatactgagacggggcaggtgatatccactttcgccactgggaaaattccc
tatgtcgtgaagcttaatccggatgaggacaagcagaatgttttgttggctggaatgagt
gataagaagattgttcagtgggatatgaataccgggcagataacccaggagtatgatcag
catctgggggctgtgaataccatcacctttgttgataacaacaggagatttgttacttct
agtgatgacaagtccctcagggtctgggaatttggtattcctgtggtgataaagtatatt
agtgagccccacatgcactccatgccttccatttcgcttcacccgaatgctaattggctt
gccgcacagagcttggataaccagatacttatttatagcacaagggagaagttccaactt
aacaagaagaagaggtttgcaggacatattgtggcgggatatgcctgtcaggtcaatttt
tctccggatgggcgatttgtcatgtcaggggatggggaggggaagtgttggttctgggac
tggaagagctgcaaggtcttcagaactctcaagtgtcatgaaggggtttgcattggcagt
gagtggcatcccttggaacagagcaaggtagcaacgtgtggctgggatgggatgataaag
tactgggactag
DBGET
integrated database retrieval system