Vigna umbellata (ricebean): 124838076
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Entry
124838076 CDS
T09662
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124838076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124838076
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124838076
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
DUF2249
Motif
Other DBs
NCBI-GeneID:
124838076
NCBI-ProteinID:
XP_047169550
LinkDB
All DBs
Position
Unknown
AA seq
323 aa
AA seq
DB search
MSNLPQSLSMGAAFGGGGPPSSSGGTGAQGSGGGKDRKMASAEQLVLELSNPELRENALL
ELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCV
ASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLS
TEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAAL
AEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDPTTRRWLQQLL
HNVGVNRVPALQAGGGFDHMIVT
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatttgccccaatcgttgtctatgggtgcggcctttggtggcggcggtccgcca
tcttcgtccggtgggactggagcacagggctccggtgggggcaaagatcggaagatggca
tctgctgagcaactggtattggaactcagcaaccctgaactccgagaaaatgcgcttctg
gaattgtccaagaagagggagctatttcaagatctggctcctttgttatggaattctttt
ggtactattgctgcacttttgcaggaaatagtttcaatttacccagttctttcaccacca
aatcttactcctgcacaatcaaatcgagtgtgtaatgctcttgctcttcttcagtgtgta
gcatctcaccctgatacaaggatgctattcctcaacgctcatatacctttatatctatac
cccttccttaatacaacaagcaagtcaagaccatttgagtacttgaggcttaccagtctt
ggtgtcatcggtgcattggtgaaggttgatgatacagaagttataagtttccttctttca
acagaaataattcctctgtgcttgcgcaccatggaaatgggtagtgagctatccaaaaca
gtagcaacatttattgttcaaaaaattcttttggacgatgtcggcctggactatatttgt
actacagccgagcgcttttttgcggtaggtagagttttggggaacatggtggcagctctt
gctgagcaaccctcatctcgtctactgaagcatatcattcggtgctatcttcgtctgtca
gataatccaagggcttgcgatgcattaagaagctgtctaccagacatgttaagagatgcc
actttcagcagttgccttcgtgaagaccccacaactagaaggtggctacaacaattgctt
cacaatgttggagtgaatagagttcctgcactacaagctggaggaggtttcgatcatatg
attgttacctga
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