Vigna umbellata (ricebean): 124838166
Help
Entry
124838166 CDS
T09662
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03440
Homologous recombination
vum03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124838166
03460 Fanconi anemia pathway
124838166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vum04121
]
124838166
03036 Chromosome and associated proteins [BR:
vum03036
]
124838166
03400 DNA repair and recombination proteins [BR:
vum03400
]
124838166
Ubiquitin system [BR:
vum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
124838166
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
124838166
DNA repair and recombination proteins [BR:
vum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
124838166
FA (Fanconi anemia) pathway
Downstream FA components
124838166
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA-2_helical
BRCA2
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
124838166
NCBI-ProteinID:
XP_047169650
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
MCSWQILSHSPNNFHWQITEHVSHASPTPLPSPIPLPSMADLLLQGSPALLPSHDAGARG
EERAIDETLSFSNSLFTTGSGKKVTISSRGLVRAKTLLDTIDINIQSTSKLFAFGETAGK
EQLQVYEESPESKLHTVINSPSVGVLHALDNGFEERNSFKQAPIKFRTAGGRSISISSGA
LRRARSLLGDSDVGDLFEGGDAGDSVFSFPLKRQTDAAAPSDYSTPVVHGMTSDSNFKTK
SFTFPMKSSRQRGLPTKFPCEGDGINLTKKFDAVGEESDCGRKSTDACGQKSLYGRSQTP
NSLVYDSSLNCFSSKVDTLGGATRRALADLSNTINTDTANNRQAASGKRRLGLSVTVSPF
KKPRSSNSPAPLEEDVGKSPHDLSQLSSDISECKGEVSTRYPFHYPRVYIKDYFVGRPME
KRACFPNLSRQVTSVNAEKYVFHKGSGDNGIGAEAFVHLLALHGASMHFATKEWVTNHYK
WIVWKLACYERYYPASSAGNFLTVSNVLEELKYRYEREVNHGHRSTIKKILEGDALSSSM
MILCISSIHSSYIEESGTCFDTKSGAQKTKAVKIELTDGWYSMNAILDVPLSKQQAAGRL
FVGQKLRLSGAGLCGWNGPVSPLEVSSTVSLLLHINGTYRAHWAERLGFCKVAGPPLAFK
CIKGNGGLIPQTLAGITRIYPILYKERLSSGRSVVMSEKMENKMTELYNQRRSAVVDGII
SEYQKESSYINYDSDSEGAKIYNMLETAEEPEFLMADMSAEQLSSFAAYKAKLNAIRQSE
KEKSIEKALKDAGLGHREVTPFMKLRVVGLTYKTRQDKPKEGIVTIWNPTEKQRLELVEG
GAYSIAGLMPSSSVFDILHLHARGSSTKWWPLSSNAREQFRPFFRGRKSTPLSSLGDIPV
SNEFDIAAYIVHVGGVYTSNQHQKQWVFVTDGSIMNGLQSEKLINSLLAICFCSPLIDHD
SSFPLISCNLAGSTVGFCNLIKKEKDHTNNIWVADANENSAYYLNFDSSNCSHLRNAASS
IRRWADNSSLIIEKLKEKVLYVVGDDCKA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcatggcaaatcctctcccactctccaaacaatttccactggcaaatcaccgaa
cacgtttcccatgcttctcccactcccctcccctctcccattcccctcccttccatggcc
gatcttcttctccaaggctcaccggccctgcttccttcccacgacgccggtgcgcgaggt
gaagagcgtgcaatagatgaaactctcagcttctcgaattcgctttttacgacaggctct
gggaaaaaagttaccatatcttctagaggtctggttagagcaaagacattgctggatacc
attgatattaatatccaaagtacaagtaaattgtttgcatttggcgaaacagccggaaag
gaacaactacaagtatatgaagaatcacctgaatcgaagctgcatacagttatcaacagt
ccttctgttggggttcttcatgcattagataatggttttgaggaaaggaattcattcaag
caagctccgattaaatttcgcactgcaggtggaagatctatatccatttcgagtggcgcg
ctgcggcgagctcggagccttctcggtgattcggatgtgggggatttgtttgaaggaggg
gatgccggcgattcagtcttctcatttcctttgaagcgacaaactgacgcagctgctcct
agtgattatagtactcctgtggttcacgggatgacatcagatagcaattttaagacgaag
agttttactttccccatgaagtcttctaggcaaagaggattgccaaccaagtttccttgt
gaaggtgatgggattaacttgaccaagaagtttgatgctgttggggaagagagtgattgc
ggcaggaaaagtacagatgcttgtggacagaagtctttgtatggcaggagccaaacacca
aattcactagtatatgattcttcattgaattgtttttcttcaaaagtagatacactgggt
ggggcaacacgaagggcattggctgatctttcaaataccattaacacggatacagcaaac
aataggcaagctgctagtggaaaacggagactagggttgtctgtaactgtttctcccttt
aaaaagccacgcagttccaactctcctgctcctttagaggaggatgttggaaaatctcct
catgatttgtctcaattgtcctctgatatctcggaatgcaaaggagaggtttctacccga
tatccatttcactatccaagggtgtacatcaaggattattttgttgggcgtccaatggaa
aagagagcgtgttttcccaacctgagtagacaggtgacatcagttaatgcggaaaagtac
gtgtttcataaaggatctggtgataatggtataggagcagaggcttttgttcatctattg
gctctacatggagcttccatgcattttgcaactaaagagtgggtcacaaatcattacaag
tggattgtctggaaattggcatgctatgagagatactacccagctagttcagctggaaat
tttttgactgtatcgaatgtgcttgaggaactgaagtacagatatgaaagagaagtgaat
catggccaccggtctaccatcaagaaaattctcgaaggggatgcattgtcttcatcaatg
atgattctatgcatttcaagtattcactctagttatatagaagaaagtgggacttgtttt
gacacaaaatctggggctcagaaaacaaaagcagtgaaaattgaactaactgatggatgg
tattcaatgaatgctattttagatgttccattgtcaaagcaacaagctgctggaagattg
ttcgtcggacagaagctccgactctcaggagcaggattatgcggctggaatgggccagtt
tcaccccttgaggtgtcatcaacagttagtttattgctgcacataaatggaacgtataga
gctcactgggcagaacggttaggattctgtaaggttgccggtcctcctttggcttttaaa
tgcataaaaggaaatggtggtctaataccgcaaacgttggctggaattactcgcatatat
cccattctttacaaggaaaggttaagcagtggacggtctgttgtcatgtcagagaagatg
gagaataaaatgacagagttgtacaatcagagacgctctgctgttgtagatggcatcatt
tctgagtatcagaaggaaagttcgtacattaattatgacagtgatagcgaaggtgctaag
atttataacatgctcgagacagcggaagaacctgaattcctaatggcagatatgagtgca
gagcagcttagttcttttgctgcgtataaggccaaactaaatgcaatcagacagtcagaa
aaggaaaaatcaatagaaaaagctttgaaagatgctggcttgggacatagagaagtcacg
ccatttatgaagttacgagtagttggattaacttataaaactcgacaagacaaacctaaa
gaaggcatagtaacaatctggaatcccactgagaagcagcgtctggagttggtggaagga
ggagcatattccattgcaggactcatgccatcaagttctgtttttgatatccttcacttg
catgctagagggtctagtaccaaatggtggcctttatcttctaatgcaagagaacagttt
aggccattttttcgtggtagaaaatcgaccccgttatcaagtttgggtgacatccctgtt
tccaacgagtttgacattgctgcatatattgtgcatgtgggaggagtttatacatcaaat
cagcatcagaagcaatgggtttttgtgacggatggatccatcatgaatggtttacagtca
gaaaagttaatcaactccttgcttgctatctgcttttgctctccgttgattgatcatgat
tcatcatttccattaatcagctgcaaccttgcaggatctacggttggtttttgtaatctt
ataaaaaaggaaaaggaccatacaaacaacatctgggttgccgatgctaacgaaaactct
gcttattatttgaattttgattcctcaaactgttctcacctcagaaatgctgccagctcc
atcagaagatgggcagacaattctagtttgataatagagaaactgaaggaaaaggtgttg
tatgtggttggtgatgattgtaaagcatag
DBGET
integrated database retrieval system
