Vigna umbellata (ricebean): 124838274
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Entry
124838274 CDS
T09662
Name
(RefSeq) tRNA pseudouridine synthase A 1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vum03016
]
124838274
Enzymes [BR:
vum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
124838274
Transfer RNA biogenesis [BR:
vum03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
124838274
Prokaryotic type
124838274
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
124838274
NCBI-ProteinID:
XP_047169797
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MSYAVGALVAPSPSPTSLPLISSTASVEVEHGVKPIQDGYKWRLVLAYEGTRYAGWQYQQ
SPPTVQCTLEKALTQATKLQRKDLSLVGASRTDVGVHAWGQVVHFFTPFNYDNLEEIHAA
LNGLLPSDIRVREISPASAEFHARFFAKSKIYHYKIYNDSVMDTFQRHFAYHSVYKLNSA
VMKEAAKYFVGKHDFSAFANSSHKDGVPDPVKQIFRFDLKEMGALLQLEVEGTGFLYRQV
RNMVALLLQIGREAIPPDIVAYILASRDRKELAKYSLSVPPHGLCLVSIKYKESHLLLPP
GCPANSFGRHHTIRKCKVPFFL
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgagttatgcagtgggagcactggttgctccatctccatctccaacttccctccctttg
ataagttccactgcttctgtggaagtggaacatggggtgaagcccattcaagatgggtat
aagtggcgtctggttctggcttacgaaggaacccgatacgcaggttggcaatatcaacag
tctccccctactgtacaatgcactctcgagaaagctttaactcaagctacaaagcttcag
aggaaggatctcagtttggttggtgctagcaggactgatgtaggagtccatgcatggggt
caggttgttcatttctttacaccttttaactatgacaatttggaagaaattcatgcagct
ttgaatggcctccttccttctgatatccgagttagagagatcagccctgcatcagctgaa
ttccatgctcgattttttgccaaaagtaagatttaccattacaagatatacaatgatagc
gtcatggatacatttcagcggcattttgcttaccatagtgtgtataaactcaatagcgct
gtaatgaaagaagctgcaaaatattttgtcgggaagcatgatttctcggcctttgccaat
tcatcccacaaagatggggtgccggatccagtgaagcaaatattcagatttgatttgaaa
gaaatgggagctcttttgcaacttgaagttgaaggcacaggtttcttgtatagacaagtc
cgaaacatggtggctttgttgcttcaaattggtagggaagctatccctcctgatattgtt
gcttatattctggcaagtcgagatcgcaaagagcttgcaaaatactcattgtctgtccct
cctcatggcctttgtcttgtttctatcaaatataaggaaagtcatctgttgcttccacca
gggtgtcctgcaaacagttttggcaggcatcataccataaggaaatgcaaagttccattc
tttctgtaa
DBGET
integrated database retrieval system
