Vigna umbellata (ricebean): 124838447
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Entry
124838447 CDS
T09662
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum00040
Pentose and glucuronate interconversions
vum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124838447
Enzymes [BR:
vum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
124838447
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Paralog
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
124838447
NCBI-ProteinID:
XP_047170006
LinkDB
All DBs
Position
Unknown
AA seq
398 aa
AA seq
DB search
MATLTILLMLSACSLLTLASPLNNRDSTKEFDALSPIPSYITESSPKNVVMNTIDSCWRG
KTNWASNRQSLADCAIGFGKDAIGGKFGDVYEVTDPSDDPVDPKPGTLRYGAIQTEPLWI
TFAKDMVISLKNELMVNSYKSIDGRGAKVEIANGACITIQGVSHVIIHGISIHDCKPGDG
GMVRSTPEHVGYREGSDGDAISIFASSNVWIDHCFLARCTDGLIDVIHASTAVTISNNYF
THHDKVMLLGHSDEYSADKVMKVTVAFNHFGSDLIERMPRVRFGYAHVVNNRYDEWQMYA
IGGSADPTIFSEGNYFTASDDSAAKQVTKRESSEKWNNWKWRSYGDEFLNGAYFVPSGYG
SCSPLYSSAQTFTATQASMVPFLTLNAGPLNCVLHKAC
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggccactttaaccattctcctaatgctctcagcatgctctctgctcactttagcttca
ccactgaataacagagattcaacaaaggagttcgatgccctctctcccattccaagctat
atcaccgagagcagccctaagaatgttgtgatgaacacaatagattcatgttggcgagga
aaaacgaattgggcttctaatcgccaatccttggcggattgtgcaattggctttggcaaa
gatgccataggaggaaagtttggtgatgtatatgaagtcaccgatccttctgatgaccct
gtagacccaaaacctggcacacttcgttatggtgcaatccaaacagaacccctttggata
actttcgccaaggacatggttatctcgctgaagaatgagctgatggtgaatagctacaaa
agcattgacgggagaggagccaaagtggagattgcaaacggggcttgcattactatacaa
ggtgttagccatgtaatcatacatggaatcagcattcatgattgtaagcctggtgatggt
ggcatggttaggagcactcctgagcatgttgggtatcgtgaaggctccgatggagatgcc
atcagcatatttgcctcctccaatgtgtggattgaccattgctttttggctcgttgcacc
gatggtctcattgatgttattcatgcctcaactgcagtcaccatctctaacaattacttc
acccaccacgacaaagtgatgctgctagggcacagcgatgaatacagcgcggataaagta
atgaaagtaacagtagcttttaaccactttggcagtgacttaatagaaagaatgccaagg
gtgaggtttggttatgcccatgtggtgaacaaccggtatgacgagtggcagatgtatgcc
attggtggcagtgccgaccctaccattttcagtgaaggcaactattttacggcttcagat
gattctgctgcaaaacaggttacgaagagggaaagtagtgaaaagtggaataattggaaa
tggaggagttatggagatgaattcttaaatggtgcttattttgtgccatctgggtatgga
agttgcagcccattgtattcatctgctcaaactttcacagccacccaggcatccatggtg
cccttcttaactctcaatgcagggccactcaactgtgttcttcacaaagcttgttaa
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