KEGG   Vigna umbellata (ricebean): 124838478
Entry
124838478         CDS       T09662                                 
Name
(RefSeq) DNA cross-link repair protein SNM1 isoform X1
  KO
K15340  DNA cross-link repair 1A protein
Organism
vum  Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:vum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vum03400]
    124838478
DNA repair and recombination proteins [BR:vum03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Nucleases
    124838478
SSDB
Motif
Pfam: DRMBL SAM_1 SAM_2 Lactamase_B_2 DUF6857 Lactamase_B
Other DBs
NCBI-GeneID: 124838478
NCBI-ProteinID: XP_047170038
LinkDB
Position
Unknown
AA seq 683 aa
MNWDENDEFEIPLTQTAMAFHELDSVDKNQRPLKKPKRKTTALRGSGKENVRPSEGCEIL
NCSLDFIPSSLDCISVCSVQHSEQDDSDSSSASLSELKQKGNYLHNSIESKLVVPRIGEL
NAADADSDSELGLLMNLCDELEEVDSSVRCPLCDVDLSNLTEEQRHLHTNNCLDKGDNVA
VPEDDKGAPHVPKVASVVDWLHGLGLGKYEVIFVREEVDWNTLQWLTEEDLLSMGITAFG
PRKKIVHALCELRKGDAAANEKQGGSLAEPVRIRNQKVKLKRDKSERKTDGSIKPPANKL
ITEYFSGFASKEKKVPASPGEQKEMKKSDLDSGRKHKSKNVTTNRKLRDVPKWCSVQGTP
FRVDAFKYLRGDCSHWFLTHFHLDHYQGLTKSFNHGKIYCSSITARLVNTNIGISYDKLH
VLPLNQKIEIAGVDVTCFDANHCPGSILVLFQPPNGKAVLHTGDFRFSDEMTINPLLKMC
PIDTLILDTTYCNPQYDFPKQEAVIQFVIDAIQAETFNPKTLFLIGSYTIGKERIFLEVA
RALSKKVHVTAAKLRLLKCLEFKEEDMQWFTSNEHESNIHVAPMWTLASFKRLKHISSQY
KDRYNLIVAFSPTGWTFGKGKKKSPGRRWQQGTIIRYEVPYSEHSSFTELKEFVKLVSHS
NIIPSVNNDGPESSDAMISLLLS
NT seq 2052 nt   +upstreamnt  +downstreamnt
atgaattgggacgagaacgatgaatttgagatccctcttactcaaacggcaatggctttt
cacgagctcgattccgtcgacaaaaatcaacggccattgaagaaaccaaaacgcaaaacg
acggcgcttcgtggcagtggcaaggagaacgtccgacccagcgagggctgcgaaattctg
aactgcagcttggatttcattccttcctccctagattgtatttcggtttgcagcgttcaa
cactcagaacaagacgacagtgattcttcttccgcgtctttatcggagctgaaacagaag
gggaattatcttcacaactcgatagagtcgaagctggtggttccgagaatcggcgagctt
aacgctgcagatgcagattctgattcggagcttggtctgttgatgaatttgtgcgacgag
ttggaggaagtagatagttccgttcggtgtcccctttgtgatgttgatctttcgaatttg
actgaggagcagagacatcttcataccaataattgtcttgacaaaggcgataacgttgcg
gttcctgaagacgataagggtgctccacatgtgccaaaagtcgcttctgttgttgattgg
cttcacgggctcggtttgggaaagtatgaagtgattttcgttagggaagaagttgattgg
aacaccttgcaatggctcacagaagaggatctcttaagcatgggcatcactgcatttggg
ccgagaaaaaagattgtgcatgccctgtgtgaactaagaaaaggagatgccgctgcaaat
gagaaacaagggggttcgttggcggagcctgtaaggattagaaaccagaaagtcaaatta
aagcgagacaaatctgaaagaaaaactgacggctctattaaaccaccagcaaacaaattg
attactgaatatttttcgggatttgcttccaaagaaaagaaagttcctgcctctcctgga
gaacaaaaggaaatgaaaaaaagtgacttggattctggtcgtaagcacaaatcaaaaaat
gtgacaacaaatagaaagctccgtgatgttcccaaatggtgttctgtacaaggaacgcct
ttccgagtggatgctttcaaatatctcagaggagattgttcccactggtttctcacacac
ttccacttggaccattatcaaggtcttaccaagtcattcaatcatggaaagatttattgc
tcctccattacagctagattagtaaatacgaacattggaatttcatatgataaattacat
gttttgcctctgaaccaaaagattgaaatagctggtgttgatgtgacttgctttgatgcc
aaccactgtccaggttccatactcgtactctttcaacctccgaatggtaaggctgtgctg
cacacgggtgatttccggtttagtgacgaaatgacaatcaatcccttactcaagatgtgt
cctatcgatactctaattcttgatacaacatactgcaatccacagtatgactttccgaaa
caagaggctgtaatacaattcgtcattgatgccattcaagcagaaacttttaatcccaag
actcttttcctgatcggcagctataccattggaaaagaaaggatattcttggaggttgct
cgcgcgcttagtaaaaaggttcacgtgactgcggcaaagttgcgtcttttaaaatgtttg
gaatttaaggaggaggatatgcagtggttcacttcaaatgaacatgaaagcaacattcat
gttgcccctatgtggacgctcgcaagcttcaaaagattgaagcacatatcaagtcaatat
aaggaccggtacaatcttatagttgctttctcccccactggttggacgtttggcaaaggt
aaaaagaagtctcccggaagaagatggcagcagggtactattataaggtatgaagtacct
tacagcgagcatagcagctttacagaactcaaagagtttgtaaaacttgtatctcatagc
aacattataccaagtgtgaataacgatggaccagaatcttctgatgcaatgatttctcta
ttgttatcttga

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