Vigna umbellata (ricebean): 124838580
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Entry
124838580 CDS
T09662
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX2
KO
K08681
pyridoxal 5'-phosphate synthase pdxT subunit [EC:
4.3.3.6
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum00750
Vitamin B6 metabolism
vum01100
Metabolic pathways
vum01240
Biosynthesis of cofactors
Module
vum_M00916
Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
124838580
Enzymes [BR:
vum01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
124838580
BRITE hierarchy
Motif
Pfam:
SNO
GATase_3
BPL_N
Peptidase_S51
GATase
DJ-1_PfpI
Motif
Other DBs
NCBI-GeneID:
124838580
NCBI-ProteinID:
XP_047170172
LinkDB
All DBs
Position
Unknown
AA seq
253 aa
AA seq
DB search
MAVVGVLALQGSFNEHIAALRRLGVKGVEIRKPEQLHTVSSLIIPGGESTTMAKLAEYHN
LFPALREFVKLGKPVWGTCAGLIFLANKAIGQKSGGQDLVGGLDCTVHRNFFGSQIQSFE
AELSVPQLASQEGGPETFRGVFIRAPAILEAGPEVLVLADYPVSSDKLLSSDTSTEEKKE
NAEEESKVIVAVRQGNILGTAFHPELTADTRWHSYFLKMSNETGEEASLSNLVPAQVTTS
HYQLIRSDLPIFQ
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcgttggcgttctcgcgctacaaggatcattcaacgagcacatagctgctctt
agaaggttaggggtgaaaggtgtggagattcgaaaaccggagcagcttcacaccgtttca
tccctcatcatccccggtggagaaagcaccaccatggctaagctcgctgagtatcataac
ttgtttcctgctttgagagagtttgtaaaattgggaaagcctgtttggggaacctgtgca
gggcttatattcttggcaaacaaagctataggacagaagagtggtggacaagatttggtc
gggggacttgattgtacagtgcatagaaatttctttggaagccagattcaaagctttgag
gcagagctttcagtgccacagcttgcctcccaggaaggtggtcctgaaacatttcgtgga
gtttttattcgtgcaccggcaattcttgaagcagggccagaagttctagtgttggctgat
tatcccgtatcttctgataaattattaagttctgacacttctaccgaagaaaaaaaggag
aatgctgaggaagaaagtaaggttattgttgctgtgagacaagggaacatactagggact
gctttccatcctgaattgacagctgatactcgatggcatagttattttttgaaaatgtca
aacgagactggagaagaggcttccttaagtaaccttgttcctgcacaagtcaccacaagt
cactatcaactgatccggagtgaccttcctatctttcaatag
DBGET
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