KEGG   Vigna umbellata (ricebean): 124838877
Entry
124838877         CDS       T09662                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
vum  Vigna umbellata (ricebean)
Pathway
vum03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:vum00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    124838877
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:vum04121]
    124838877
   03036 Chromosome and associated proteins [BR:vum03036]
    124838877
Enzymes [BR:vum01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     124838877
Ubiquitin system [BR:vum04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    124838877
Chromosome and associated proteins [BR:vum03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     124838877
    Noncanonical PRC1 (PRC1.1)
     124838877
    Noncanonical PRC1 (PRC1.3/1.5)
     124838877
    Noncanonical PRC1 (PRC1.6)
     124838877
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 zf-RING_4 zf-rbx1 zf-UDP zf-Nse zf-RING_11 zf-C3HC4_5 zf-RING_6 zf-RING_10
Other DBs
NCBI-GeneID: 124838877
NCBI-ProteinID: XP_047170542
LinkDB
Position
Unknown
AA seq 498 aa
MPAQKRSLPDSLDEGDTSHHNLFHSRHAKQQLQQHQDQSHEHDADHHHEEEEQEEEEEGD
GEGEEDDDEEEEEDEEVEEAAHDNDGKETPQDSDETPSSGSEEKPEFVYVELLEIRKDVQ
CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALI
AALYPDIEKYEEEELEFREEEKNRNKQIQASIAKVVQRQSEALVKRRKDTPGVFLTRSQR
NQRNIHSRRQSQTIEGSEDNEEDNDNNEKDSSSADERSTEHRQKRRKRWARVRPSQPSSS
MASPDGGNDSDMDISRENRGISRQVSKHRKLTWGRGGFRSHTRHGSGGGSNSKSSRSSRL
SKFVDHLRSLDENTNEFDVRLMLVSLDHQNTPSLPQPYLCCRPTLSVEHLYEYVARQTPF
PVEGIEILAVKGCHSTNRDKSADENSALIYDELSTLVIEPHKDELEILQEHETLAGLRSK
CISKMGHLILAYRRKEVS
NT seq 1497 nt   +upstreamnt  +downstreamnt
atgcctgcccagaagcgctccctacccgactccctcgacgaaggggacacttcgcaccac
aacctcttccattctcgacatgcgaagcaacaactgcaacaacatcaggaccagtcgcac
gagcacgacgcggatcaccaccatgaagaagaggaacaagaggaagaagaagaaggggac
ggagaaggagaagaagatgatgacgaggaagaagaagaagacgaagaagtagaagaagcg
gcgcatgataacgacggcaaggaaacgccacaggattccgacgaaaccccatcttctggc
tctgaagaaaaacctgaatttgtgtatgtagaacttttggaaatacgtaaagatgtccaa
tgtccaatttgccttggcattatcaagaagacaagaactgtcatggaatgcttgcaccgc
ttttgcagggaatgcattgacaaatcaatgcgactggggaataatgaatgtccggcctgc
cgcacacattgtgccagtcgccgttcgctgagagatgatccaaattatgatgcccttatt
gctgctttatatccagatattgagaagtacgaagaagaggagctagaatttcgtgaagag
gagaagaaccgcaataagcagattcaagcttcaatagcaaaagtagttcaacgacaatca
gaagcacttgttaagagacggaaagatacaccaggagtatttctaacaagatcacagcgt
aatcaacgaaacattcattctaggagacaaagtcaaacaattgaaggatcggaagacaat
gaggaggacaacgacaataatgaaaaggattcatcttcagccgatgaacgaagtacagaa
cacaggcagaaaaggcgaaagagatgggctagagttcgcccctctcaaccctcatcatct
atggcaagtccagatggaggcaatgatagtgacatggatataagtagagaaaatcgtgga
atttcaaggcaggtgtcaaaacatagaaagcttacttggggaagaggtggtttcagaagt
cacacacgacatggcagtggtggtggtagcaatagcaaaagttctcgcagtagtcgattg
tctaagtttgttgatcatctaagaagcttggatgaaaacactaatgagtttgacgtccgt
ctcatgcttgtttctcttgatcatcaaaatacaccaagtttgccacaaccttacctttgc
tgtcgaccaactttgtctgtggagcacctttacgaatatgttgctcgtcagacacctttt
ccagttgaaggaatcgagatactggcagtcaaaggatgccacagcacaaatcgtgacaag
tcagctgatgagaattcagccctcatatatgatgagctatcgacgctggttatagagcca
cacaaagatgaactggaaattttacaagaacacgagactctggcagggcttagatccaaa
tgcatatccaagatggggcatttgattcttgcatacaggcggaaggaagtatcatag

DBGET integrated database retrieval system