Vigna umbellata (ricebean): 124838903
Help
Entry
124838903 CDS
T09662
Name
(RefSeq) eukaryotic initiation factor 4A-3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03013
Nucleocytoplasmic transport
vum03015
mRNA surveillance pathway
vum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124838903
09122 Translation
03013 Nucleocytoplasmic transport
124838903
03015 mRNA surveillance pathway
124838903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124838903
03041 Spliceosome [BR:
vum03041
]
124838903
03009 Ribosome biogenesis [BR:
vum03009
]
124838903
03012 Translation factors [BR:
vum03012
]
124838903
Enzymes [BR:
vum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124838903
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124838903
mRNA cycle factors
Stress granule specific factors
124838903
Spliceosome [BR:
vum03041
]
Complex C
Other components
EJC/TREX
124838903
Ribosome biogenesis [BR:
vum03009
]
Eukaryotic type
90S particles
Helicases
124838903
Translation factors [BR:
vum03012
]
Eukaryotic type
Initiation factors
eIF-4
124838903
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Cas3-like_C_2
TniB
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
124838903
NCBI-ProteinID:
XP_047170575
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MATTSVVPANRRRAVNAAEDLDFETTEGVKAIASFEEMGIKDDLLRGIYQYGFEKPSAIQ
QRAVTPIIQGRDVIAQAQSGTGKTSMIALTVCQVVDTSVREVQALILSPTRELASQTEKV
ILAIGDFINIQAHACIGGKSVGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAIKMLV
LDESDEMLSRGFKDQIYDVYRYLPPDLQVNLISATLPHEILEMTNKFMTDPVRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRNNNFTVS
SMHGDMPQKERDAIMGEFRAGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRI
GRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaacgtcggtggtgccggcgaaccggcggagggcggtgaacgcggcggaggac
ttggacttcgagacgacggagggtgtgaaagcgatcgcgagcttcgaggagatggggata
aaggacgatctgctccgtggaatctaccagtacggcttcgagaagccctctgccattcag
caacgggccgtcacgccaatcattcagggccgtgacgttatcgcccaggctcaatccgga
accggcaaaacctccatgattgccctcaccgtttgccaggttgtcgatacctccgtcaga
gaggttcaggctttgatattatcaccaacaagggaactggcctctcagactgagaaggtt
atattggctattggggatttcattaacatacaggcacatgcttgcattggaggtaaaagt
gtgggtgaggatattaggaaacttgagtatggagttcatgtggtgtccggaactcctggc
cgagtctgtgacatgatcaaaaggagaacattgcgcacgagggctatcaagatgctagtt
ctggacgaatctgatgagatgttgagcagaggatttaaagaccaaatttatgatgtgtat
agatatctcccccctgaccttcaggttaacttgatttctgctacccttcctcatgaaata
ctcgaaatgacaaacaaattcatgaccgatcctgtaaggatccttgtaaaacgtgatgaa
ttgacattagagggcatcaagcaattttttgttgcagtcgaaagggaggagtggaagttt
gataccctgtgtgatctttatgatacactcaccatcactcaagctgttatattctgtaac
accaagcggaaggttgactggttaactgaaaaaatgcgtaacaataatttcactgtctca
tcaatgcatggtgacatgcctcagaaagaaagagatgctattatgggagaatttcgtgct
ggaacaactcgggtactaataacaactgatgtttgggcccgtggtcttgatgtacagcag
gtgtctctagttatcaattatgaccttccaaacaatcgagagctttacattcatcgaatt
ggtcgctctggacgttttgggcgaaagggtgttgcaataaattttgtgaagagtgatgac
atcaagatattgagagacattgagcaatactacagtactcagattgatgaaatgccaatg
aatgttgctgatcttatataa
DBGET
integrated database retrieval system
