Vigna umbellata (ricebean): 124839405
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Entry
124839405 CDS
T09662
Name
(RefSeq) protein HEAT STRESS TOLERANT DWD 1-like isoform X1
KO
K14848
ribosome assembly protein RRB1
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vum03009
]
124839405
Ribosome biogenesis [BR:
vum03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
124839405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
CAF1C_H4-bd
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_1st
WDR90_beta-prop_4th
PALB2_WD40
Rrn6_beta-prop
Motif
Other DBs
NCBI-GeneID:
124839405
NCBI-ProteinID:
XP_047171173
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MTRGIKHRKKAKNKNKGSKKEGGSSSSLAPQIPAKVWQPGVDKLEEGEELQCDPSAYNSL
HAFHIGWPCLSFDILHDSLGLVRTEFPHTVYFMAGTQAEKPSWNSIGIFKVSNISGKRRE
PVPKVETDDSGMDGEDSDSDDDSEDEDEGVAQGPSLQLRKVAHQGCINRIRSMPQNPHIC
AAWADTGYVQVWDLSSHLNALAETETEGVQGVAAVFTQDPLHKFKHKDEGYAIDWSLLVP
GRLVSGDCDNSIYLWEPTSAGTWNVDNAPFTGHTGSVEDLQWSPTEPHVFASCSVDGNIA
IWDIRLGKSPAASFKAHNADVNVISWNRLASCMLASGSDDGTISIRDLRLLKEGDSLVAH
FEYHKHPITSIEWSPHEASSLAVSSADNQLTIWDLSLEKDEEEEAEFKAKTREQVNAPED
LPPQLLFIHQGQKDLKELHWHAQIPGMIVSTAADGFNILMPSNIQSTSRNYIGTHRFLE
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgactcggggcataaaacaccggaagaaagccaagaacaaaaacaagggctctaagaaa
gagggtgggtcttcttcatctttggctccacaaattccagctaaggtgtggcaacccggg
gtggataagttagaggaaggtgaagagcttcagtgtgacccttctgcttacaattctctt
catgcttttcacattggatggccctgtttgagctttgatattctacatgactctctgggt
ttggttcgaacagaatttccacatacagtatatttcatggcagggactcaggcagagaaa
ccttcttggaattctattggaatttttaaagtatcaaatatttctggaaagagacgggaa
ccggtaccaaaagttgaaactgatgactctggaatggatggtgaggatagtgatagtgat
gatgatagtgaggatgaagatgaaggtgttgctcagggtcccagtttgcagttacggaag
gttgcacaccaaggatgtatcaaccgtattcgctccatgccacaaaatccccatatatgt
gcagcttgggctgatacaggttatgtacaggtctgggacctaagctctcatctcaatgct
ctggctgagaccgaaacagaaggtgtccaaggagttgcagcagttttcactcaggaccca
ttgcataaatttaaacacaaagacgaaggttatgctatagactggagtcttcttgttcct
ggaaggcttgtatctggggattgtgataatagcatttatctgtgggagcctacatctgct
ggaacatggaatgttgataatgctccatttactggacatactggtagtgttgaagatctg
caatggagccctacagaacctcacgtttttgcttcttgttctgtggatggaaatattgct
atatgggatatccgtttggggaagtcaccggctgcatcttttaaggcacataatgctgac
gtgaatgtcatatcatggaacaggttggctagttgtatgttggcctcgggaagtgatgat
gggactatttctattcgtgatctcagactgctcaaggaaggagattctttggtagcacat
tttgaataccacaaacatccaatcacatccattgagtggagtccacatgaagcctcttca
ttggctgtttcatctgctgataatcagcttacaatatgggacctttcattagaaaaggat
gaagaagaggaggctgaatttaaagctaaaaccagagaacaagttaatgctcctgaagat
ctgcctccccaactattgtttattcaccagggacagaaagacctgaaggaattacattgg
cacgcacagattcctggaatgattgtttctacagcagcagatggattcaacatacttatg
ccttcaaatattcagagcacntcaaggaattacattggcacgcacagattcctggaatga
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