Vigna umbellata (ricebean): 124839706
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Entry
124839706 CDS
T09662
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum00040
Pentose and glucuronate interconversions
vum01100
Metabolic pathways
Module
vum_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124839706
Enzymes [BR:
vum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
124839706
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
124839706
NCBI-ProteinID:
XP_047171566
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All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MAKDLFNTWCINPSYTIKKSIFSEEHNPERSLPSYKDSNSVCAYSAGSSVTKDKKKDLRF
LMPTSNTHNVINYGAKGDGKTDDSKAFLSAWQKTCSTHGASTLVIPSKRVFLVKNIILKG
PCQATKIQIQLQGRIVAPQKNAWQGDKSTMILFTNINGLRIVGKGGLIDGYGSSWWPCKN
CPRPAVLGFNTCNGLSVSYLRITNSPQAHITINGCDGAIFSHISIRSPADSPNTDGIDIS
SSKNIMIKDSNIATGDDCIAIIGDSSDINATGIACGPGHGISIGSLGKNNGHDKVEHVRV
YNSSFTKTTNGARIKTFSGGSGYAKRITFEKITLNQVYNPIIIDQHYNNIMNGGGGVQLS
EVTFRGFRGTSANDRAINLACGSPGCFNIVLDKIKIVSSQPGKPASCSCTNVHGRSTSTI
PNCNYSLR
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagacttgttcaacacatggtgcatcaaccctagttataccatcaaaaagagt
atttttagtgaagaacataatcctgaaaggtccttgccaagctacaaagattcaaattca
gtatgtgcatattctgcaggatcatcagtcaccaaagacaagaagaaagatcttaggttc
ttgatgccaacttccaacacacacaatgtgattaattatggtgctaaaggagatggtaaa
acagatgactccaaggcatttctaagtgcatggcaaaagacttgttcaacacatggtgca
tcaaccctagttataccatcaaaaagagtatttttagtgaagaacataatcctgaaaggt
ccttgccaagctacaaagattcaaattcagcttcaaggaagaatagtggcaccacaaaag
aatgcatggcaaggtgataaatctacgatgattttgttcacaaacataaacggtctcaga
attgtcggaaaaggaggattaatcgatggttatggttcctcttggtggccatgcaaaaat
tgtccaagaccagcagtccttggtttcaatacatgcaatggtctcagtgttagttatctg
agaatcacaaatagtccacaagctcacataaccataaatggatgcgacggtgccatattc
tcacatattagcattcggtctcctgctgatagtcctaacactgatggaattgacatttct
tcttccaaaaatatcatgataaaagattccaacatagctactggtgatgattgtattgca
atcataggtgactcttctgacattaatgccactggaattgcttgtggaccaggccatgga
ataagcattggaagcttgggtaaaaacaatggccatgacaaagtggaacatgttcgggtt
tataatagtagcttcacaaaaactacaaacggagcaagaatcaagacattttctggtgga
tcaggttatgccaaacgaatcacatttgagaaaatcacattaaaccaagtttacaaccca
ataattatagatcaacactataataacataatgaatggaggaggaggagtccaactgagt
gaggtgacatttcgtgggtttcgaggaacatctgcaaacgacagagctattaatttagct
tgtggttcaccaggttgcttcaacattgtgttggataagattaaaattgtttcttctcaa
ccaggaaaaccagcttcttgttcttgtactaatgttcatggaagatccacatctactatt
ccaaattgtaattactcgttgagatga
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