Vigna umbellata (ricebean): 124839944
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Entry
124839944 CDS
T09662
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum04142
Lysosome biogenesis
vum04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
124839944
04148 Efferocytosis
124839944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vum04131
]
124839944
Membrane trafficking [BR:
vum04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
124839944
Hops complex
124839944
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS18_solenoid_2nd
VPS11_C
Clathrin
TPR_Vps41
zf-C3H2C3
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
zf_RING_Vps8_fungal
zf-C3HC4_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
124839944
NCBI-ProteinID:
XP_047171841
LinkDB
All DBs
Position
Unknown
AA seq
961 aa
AA seq
DB search
MYQWRKFEFFEEKYGAKCTVPEGDGGDDVIREKKIECCSSGRGKVVTGFDDGVVCFFDRG
LKFNYAFQPHSSNVLFLQQLKQRNLLVTIGEDEQLTPQKTALCLKVFDLDKMQPESSSMT
SPECVGILRIFTNQFPEAKITSFLVLEEVPPILLIAIGLDNGSIYCIKGDIARERITRFK
LQVENNQSDKTLSAVTGLGFKVDGQSLQLFAVTPSSVSLFSLHNQPPRRQTLDQIGCGVN
SVAMSERSELIIGRPEAVYFYEVDGRGPCWAFEGEKKLLGWFRGYLLCVIADQRTGKHTF
NIYDLKNRLIAHSALVKEVSHLLYEWGNIILIMNDKSALCIGEKDMESKLDMLFKKNLYT
VAINLVQTQQADAAATAEVLRKYGDHLYSKQDYDESMAQYILTIGHLEPSYVIQKFLDAQ
RIYNLTNYLEKLHEKGLASKDHTTLLLNCYTKLKDVEKLNLFIKSDDSIGELKFDVETAI
RVCRAANYHEHAMYVAKKAGRHEWYLKILLEDLGSYEEALEYISSLESSQAGMTIKEYGK
ILIEHKPVETIQILIRLCTEDGDRGRSNGMYMSMLPSPVDFLSIFIHHPQSLMDFLEKYT
NKVNDSPAQVEIHNTLLELYISNELNFPSMSQVNDGGNYLNGVSAKTMSAQSNGNTANHK
SSAQGKDLLERHKKGLHLLKSAWPPETEHPLYDVDLAIILCEMNAFKDGLLYLYEKMKLY
KEVIACYMQAHDHEGLIACCKRLGDSVKGGDSSLWADVLKYFGELGEDCSKEVKEVLTYI
ERDDILPPIIVLQTLSRNPCLTLSVIKDYIARKLERESKMIEEDRQAIEKYQEDTLSMRK
EIQDLRTNARIFQLSKCTACTFTLDLPAVHFMCMHSFHLRCLGDNEKECPECAPEYRSVL
EIKRNLEQNSKDQDRFFHQVKSSKDGFSVIAEYFGKGIISKISNGSTSGPRSGTASSSSG
F
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgtatcagtggcggaagttcgagtttttcgaggaaaagtacggcgccaagtgcacggtt
cccgagggcgacggcggagacgacgtcatccgggagaagaagatcgagtgctgctccagc
ggtaggggcaaagtcgtcaccggcttcgacgacggcgtcgtttgctttttcgatcgaggc
ttaaagttcaactacgctttccaacctcactcctctaacgttctctttcttcagcaactc
aagcaacgcaatcttctggtaacaattggggaggatgaacagcttactccccagaaaaca
gctttatgcctcaaggtttttgaccttgacaagatgcaacctgagagttcgagcatgaca
agtcctgaatgtgttgggatattgcggatattcactaatcagtttccagaggcaaagatt
acatcttttttggttttagaagaagtgccacccatactgctcatagctattggtttggac
aatggttctatttactgcatcaaaggagacattgcacgggagcgtatcacgcgttttaag
cttcaggttgaaaacaaccaatcggacaaaactctttctgctgtaactggacttgggttt
aaggtggatggtcaatcactacagttatttgctgtgactccaagttcagtgagtttgttt
tcgttgcataatcaaccaccgagaaggcaaacccttgatcagattggatgtggtgtaaac
agtgttgctatgagtgaacgctctgagttgataattggtcgaccagaggcagtatatttt
tatgaagttgatgggcgtggtccttgttgggcttttgagggagagaagaaattgctcgga
tggttccgtggataccttttgtgtgttattgcagatcaaagaacaggaaagcatactttc
aacatctatgatctgaagaatcgattaatagcccacagcgcattggttaaagaagtttct
catttgctttatgaatggggtaacatcatactcataatgaatgacaaatcagctttatgt
attggagaaaaggatatggaaagcaagttagacatgttattcaagaaaaacctatatact
gtagcaataaatcttgtacagactcaacaagcagatgctgcggctactgctgaagtgcta
aggaaatatggggatcatctatatagcaagcaagactatgatgaatcaatggcccagtac
atacttactattggtcaccttgaaccttcttatgttatacagaagtttttggatgctcaa
agaatctacaacctcacaaattacttagaaaagctacatgagaagggtcttgcttctaaa
gatcacaccacacttctattaaactgttacaccaaattgaaagacgttgaaaagttaaat
ctatttattaaaagtgatgacagcattggggaacttaaatttgacgtagaaacagcaatc
agggtttgccgtgctgccaattaccatgagcatgcaatgtatgttgcaaagaaggcaggg
aggcatgagtggtacttgaagatcttgcttgaagatctgggtagctatgaagaagccttg
gaatacatttcaagccttgaatcaagtcaggcagggatgacaataaaagagtatgggaag
attctgattgagcacaagccagtggagactattcagatcctcataaggctttgcactgaa
gatggtgaccgaggacgctcaaatggaatgtatatgtctatgttgccatctcctgttgat
tttcttagcattttcattcatcatcctcagtcccttatggattttctagagaaatataca
aataaggttaacgactcacctgctcaagttgagattcataatacccttttagagttgtat
atatccaatgaattgaactttccttcaatgtcgcaagttaatgatggtggaaattatctt
aatggagtatcagcaaaaactatgagtgctcagtctaacggaaacactgctaatcacaaa
agttctgcacagggaaaggaccttcttgaaaggcataaaaagggtttacacttgcttaag
agtgcatggcctccggagacagagcacccactatatgatgttgatttagcaattatacta
tgtgaaatgaatgcattcaaagatggacttttgtatttatatgaaaagatgaaactctat
aaagaagtgattgcatgctatatgcaagcacatgatcatgaggggttaattgcatgctgc
aaaaggctgggggattcagttaaaggaggggactcatctctttgggccgatgtacttaaa
tattttggtgagcttggagaagattgttctaaagaagtaaaagaagttctgacttatatt
gagagggatgatattttgcccccaataattgtgcttcaaactctctcccgaaatccatgc
ctcacactttctgtgattaaagattacattgctcgaaagcttgagcgggaatcaaagatg
atagaggaggaccgacaagctattgagaaatatcaggaagatacactctcaatgaggaaa
gagattcaagatcttagaacaaatgctagaatttttcagcttagcaagtgcactgcatgc
accttcacccttgatctgcctgctgtgcacttcatgtgcatgcactcattccacctgcgc
tgccttggcgataatgaaaaagaatgccctgagtgtgctcctgagtataggtctgtcttg
gaaattaaaagaaatttagagcaaaattctaaggatcaggacagatttttccaccaggtg
aagagctctaaagatgggttttccgtcattgccgaatattttgggaaagggatcatcagc
aaaataagtaatggatccacttctggacccagatccggaactgcatcatcctctagtggt
ttctaa
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