KEGG   Vigna umbellata (ricebean): 124840091
Entry
124840091         CDS       T09662                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
vum  Vigna umbellata (ricebean)
Pathway
vum03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:vum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    124840091
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vum03021]
    124840091
Enzymes [BR:vum01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     124840091
Transcription machinery [BR:vum03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     124840091
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 CFAP77
Other DBs
NCBI-GeneID: 124840091
NCBI-ProteinID: XP_047172038
LinkDB
Position
Unknown
AA seq 1201 aa
MGHIGSSKDGTKAGMATAMMDIDGDSGDDDLGDLDPTNAEILEEFGGEDAFRYHCKKFSM
LFFEEYGLISHQINSYNHYVNVGLQRTFDGFGDXVLSPGFDPSKKGDNEHYRYASIKFGK
VKLDKPMVWGGELNNQELKMLPRHARLQRMTYASKMKILVKVQVYVPKKIRSDKFKTGKE
EFLDKEILTEDESEIIIGKLPVMVKSDLCWMKDEKDDCEFDHGGYFLIKGAEKTFIAQEQ
LYLKRLWVINSPGWMIAYKSQMKRNRMVIKLVGNSRNEGGENGDMFLTVYFLSVEVPVWV
LFLALGVGSDKDVVDLIGCDNDDVRIQNILLASVCDADEKCGAFRSGRNAVQYLEKCIKG
VRFPPPESIEECLEIYVFPGISGLNRKARFLAYMVKGLLLAYTGRRKCDNRDDFRNKRLE
LANELLERELKVHIAHVRKRMSKALQRDLYGDRDVRPIEYYVDASIITNGLQRAFSTGAW
SHPYKRMERISGVVATVGRTNPLQTMAELRRARQQVQYTGKVGDARYPHPSHWGKVCFLS
TPDGENCGLVKNMAVTGLVSTDVSNASESILPTLLDCGMEELVNDTKTHLGNKDKVFLNG
DWVGVCPDSSWFVAELRSKRRKNELPHQVEIKRDQSQHEVRIYSDAGRILRPLLVVGNLL
KIKRFKSERYSFLTLLEEGVVELIGPEEEEDCCTAWGVQYLFGKEGKRSVKYTHCELDMS
FLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIGFSTLNPNIRVDTLSHRLHYPQRPLFQ
TMTSDCLGKPTYPLGQSKIHPKAEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLQRGMFR
SEHIRSYKSEIDNKDSSEKKRKPEGNINFGKLQSKIGRVDSLDDDGFPYVGANLQSGDII
IGRCAESGADHSVKLKHTERGYVQKVVLSSNDEGKNFAAVSLRQVRSPVLGDKFSSMHGQ
KGVLGFLECQENFPFTRQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGKLRHATP
FSTPSVDAITDQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLHHMSEDKVKFR
NTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLYERLFTLSDSSQIHICTQC
KNVSNVILRPVSGGRKVRGPYCRHCESADDIVVAHVPYGAKLLCQELFSMGINLKFETQL
C
NT seq 3606 nt   +upstreamnt  +downstreamnt
atgggtcacatcggttccagcaaggatggcacaaaggcagggatggcgaccgcgatgatg
gatatcgacggtgacagcggcgacgatgacctcggtgacctcgacccgaccaacgccgaa
atccttgaagaattcggcggagaggacgcattccggtaccactgcaagaagttctcgatg
ctgttctttgaggagtacggtctgatcagccaccaaataaactcctacaaccactacgtc
aacgtcggcctccagagaactttcgacggcttcggtgacnttgtcctatcgcccggcttc
gacccttccaagaagggagataacgagcactaccgctacgcctccatcaagttcggcaag
gtcaagctcgacaagcccatggtctggggcggtgagttaaacaaccaggagttgaagatg
cttccgcgacacgcgcggcttcagaggatgacctacgcgtcgaaaatgaaaatcttagtc
aaagttcaggtgtatgttccgaagaagattcggagtgataagttcaagactgggaaggaa
gagttccttgataaggagattctgacggaagacgagagcgagatcatcattggcaaattg
cctgtcatggtcaagtcggatttatgttggatgaaagatgaaaaggatgattgtgaattt
gaccatggaggttattttctcataaagggtgccgagaagacttttattgcacaggagcaa
ctgtatttaaagaggctttgggttataaacagtccaggttggatgattgcctacaagtca
cagatgaagagaaataggatggttattaaactggtaggcaattctaggaatgaaggaggg
gagaatggagacatgtttcttactgtgtattttttatctgttgaggttcctgtgtgggta
ctatttttagcacttggtgtcggatctgataaagatgttgtagatctcattggctgtgac
aatgatgatgttagaattcagaatattctccttgcgtctgtttgtgatgctgatgagaaa
tgtggcgcatttcggagtggtaggaatgcagttcaatatttagagaagtgtataaagggt
gtccgatttccacctcctgagtctattgaggagtgccttgaaatttatgtctttcctgga
atcagcggcttaaacagaaaggcacgtttccttgcatatatggtgaagggtctcttgctg
gcttatactggccgcagaaaatgcgacaacagggatgatttccgtaataagaggcttgaa
ttggccaatgaacttcttgagcgtgagttgaaagtgcatatagcacatgttcggaagaga
atgtccaaggcactgcaaagggatctctatggagatagagatgtacgccccattgagtat
tatgttgatgcgtcaataattacaaatggtttgcaaagggcattttcaaccggagcatgg
tcacatccgtacaagaggatggaaaggatctctggtgtggttgcaactgttgggcgcact
aatcccttacaaaccatggctgagctaagaagagcaaggcagcaagttcagtacacggga
aaagttggggatgctagatatccgcatccttctcactggggcaaggtttgttttctctct
accccagatggtgaaaattgtggactagtaaaaaatatggctgtcacgggactagtaagc
actgatgtatctaatgcatctgaatctatactgcctacattgttggattgtgggatggaa
gaacttgtcaatgatactaaaactcatctgggaaacaaagacaaagtcttcctaaacggt
gattgggttggagtgtgccctgattccagttggtttgtggctgagctacgaagtaaaaga
cgaaaaaatgaactgccccatcaggtggaaatcaagagagatcaatctcaacatgaagtg
cgtatatactctgatgcaggaaggattctacgtcctcttttagtagttggtaatctacta
aaaattaaaagatttaaatcagaacgttattctttccttactttactggaagaaggtgtt
gttgagctaattggacctgaagaagaggaagactgctgtactgcctggggcgttcagtat
ttatttggaaaagaggggaaaagatctgtcaagtacacgcactgtgaacttgatatgtca
ttcttattgggtttaagttgttcacttgtcccatttgccaatcatgaccatgcaaggagg
gtgctctaccaatctcagaagcactcctcacaggctattggcttttctactttaaacccg
aatattagagttgatactttgtctcatcggttacactatccccaaaggcccctttttcaa
acaatgacttcagattgtcttggaaaaccaacttatccactgggtcaaagtaaaatacat
ccaaaggcggaattctataatgggcagaacgcaattgtggctgtcaatgtacatctagga
tacaatcaagaagattccttggtgatgaatcgggcttcattgcagcgtggtatgttcaga
tctgagcacataaggagttacaaatctgaaattgataataaggattcttcagagaagaag
cgcaaacctgaaggcaatataaattttggaaagcttcaaagtaaaattggtcgagttgat
agccttgatgatgatggctttccatatgttggggcaaatttgcaaagtggtgatattatt
attgggcggtgtgctgagtctggtgcagaccatagtgtgaagttaaagcacactgaaagg
ggttatgtacaaaaggttgtgctgtcttcaaatgacgaggggaaaaattttgctgcggtt
tcattgagacaggttcgaagtccagttcttggtgataagttctccagtatgcatggacaa
aagggtgttttgggatttctggagtgtcaggaaaattttcctttcactagacaaggcatt
gttcctgatatagtcattaatccgcatgcctttccctcgcgacaaactcctggccaactc
ctagaagctgctttaggaaaggggattgcttgtggtggtaaactgagacatgctacgcct
ttctccactccttctgtagatgccattactgaccagcttcacagagctgggttttcaaga
tggggaaacgagagggtatacaatggaaggactggtgagatggtccgatcactcattttt
atgggaccaacgttttaccaacgtctgcatcatatgtctgaagacaaggtgaaattccgc
aacaccggtcctgttcaccctttgacccgacagcctgtagctgacagaaaacgatttgga
ggtatcaagtttggtgaaatggagcgcgattgcttgatagctcatggtgcttcagccaac
ctgtatgaacgcctctttacactcagtgactcgtctcagattcacatctgcacccaatgc
aaaaatgtttcaaatgtgatcttgcggccagtctctggtggccggaaagtacgaggacct
tattgccgccactgtgaatccgctgatgacattgtggttgcccatgttccatacggagca
aaattgttatgccaggagctctttagcatgggcataaatcttaaatttgaaacccaactt
tgctag

DBGET integrated database retrieval system