Vigna umbellata (ricebean): 124840274
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Entry
124840274 CDS
T09662
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03440
Homologous recombination
vum03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124840274
03460 Fanconi anemia pathway
124840274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vum03032
]
124840274
03400 DNA repair and recombination proteins [BR:
vum03400
]
124840274
Enzymes [BR:
vum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
124840274
DNA replication proteins [BR:
vum03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
124840274
DNA repair and recombination proteins [BR:
vum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
124840274
Bloom's syndrome complex (BTR)
124840274
FA (Fanconi anemia) pathway
124840274
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
HCV_env
DUF1690
Motif
Other DBs
NCBI-GeneID:
124840274
NCBI-ProteinID:
XP_047172259
LinkDB
All DBs
Position
Unknown
AA seq
1117 aa
AA seq
DB search
MQKKSTLPLSDANANRKRKEVRSKETLVKLLRWHFGYPDFRGMQLDAIQSVLSGKDCFCL
MPTGGGKSMCYQIPALAKPGIVLVVSPLIALMENQVMALKEKGIAADFLSSTKTADAKVK
IHEDLDSGKPSTRLLYVTPELIATPGFMSKLTKIYTRGLLNLIAIDEAHCISSWGHDFRP
SYRKLSSLRSHLPDVPILALTATAAPKVQKDVVESLRMQNPLILKSSFNRPNIYYEVRYK
DLLDDAFADLSNTLKSLGDVCAIVYCLERSMCDDLSSNLSQSGISCAAYHAGLNNKMRTS
VLDDWISSKIKVIVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSL
LYYGIDDRKRMEFILSKSGSKKSSSSQEESSKISLIAFNQIVEYCEGSGCRRKRILESFG
EQVTASLCGKTCDACRHANLVARCLEDLKTVCALRHKNGSSRVFITSSTAATTGEQLSEF
WNRGEEASGSEEDISDSEDGNEVINNLTRSKLQSRLGVNEKLAMLQRAEENFYRNNNTYX
NVVDPTDEVFYLNDHGSEGFRYKDLLDDAFADLSNTLKSLGDVCAIVYCLERSMCDDLSS
NLSQSGISCAAYHAGLNNKMRTSVLDDWISSKIKVIVATVAFGMPLHVGVCCGGLMNFVA
LFIVVAIRSTDYNDFWHDTWCDIYQAKMLCDGTFVETKGHGAMMLLSLWSSFRMGIDRKD
VRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGIDDRKRMEFILSKSGSKKSSSSQ
EESSKISLIAFNQIVEYCEGSGCRRKRILESFGEQVTASLCGKTCDACRHANLVARCLED
LKTVCALRHKNGSSRVFITSSTAATTGEQLSEFWNRGEEASGSEEDISDSEDGNEVINNL
TRSKLQSRLGVNEKLAMLQRAEENFYRNNNTYKQNNKGDKNAISDPMRGSSRQRLQNALK
QVHQRLDDFKIEVDTSASFLEDECYKKYGKAGKSFYYSQVASTVRWLTTATSSELMNRLC
AINASAEAEQSLTPAEQPFKPPPTLDPCAEDTSNEYSGNARSETSPCIVPMESCSFNNTN
LPQIPSFSEFLNSRKTKGDQLNDTKKHSRIEKRMRMQ
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagaagtcgacattgccactgagcgacgcgaatgcgaacagaaagaggaaggaa
gtgcgcagcaaggaaacattggtgaagcttctaagatggcattttgggtaccctgatttt
aggggcatgcaattggacgctattcagtcggtgctttcaggaaaggattgtttttgtctt
atgccgactgggggaggcaagtcaatgtgttatcagatccctgcattggcaaaaccagga
attgtgctcgttgtatctcctttaatagccttaatggaaaaccaagtaatggcactgaaa
gagaaagggattgcagcagattttctctcctcaacaaaaacagcggatgctaaagtaaag
attcacgaggaccttgattctggaaaaccttctacaaggctgctatatgtgactccagag
ttaatagcaacaccagggtttatgtcaaagctcacaaagatttatactagggggctgcta
aatctcattgccatagatgaggcgcattgcatctcaagttggggtcatgatttcagacct
agctaccgtaagctttcatctttgagaagccacctaccagatgtaccaatattagctttg
actgctactgctgcgccaaaggttcagaaggatgtagttgaatccttgcggatgcaaaat
ccattaatactcaagtcttcatttaatcgtccaaatatatattatgaagttagatacaaa
gatctattggatgatgcttttgctgatttatctaatacactcaaatctctgggagatgtc
tgtgcaatagtgtattgccttgaacgttcaatgtgtgatgacttatcaagtaatctatcc
caaagtggtatttcatgtgctgcttatcatgcaggattgaataataaaatgcgaacttcg
gtgttagatgattggatttcttctaagataaaagttattgttgctactgtggcttttgga
atgggcattgatagaaaggatgtcagaattgtttgccatttcaatattcccaagtcaatg
gaagcattctatcaagagtccggccgagctggtcgtgatcaattgccatctagaagtctg
ttgtactatgggatagacgatcgcaaaagaatggaatttatattaagtaaatcggggagc
aagaagtcatctagttcacaggaagagtcatccaaaatatccctgattgctttcaatcag
atagttgaatactgtgaaggatctggatgccgcaggaaaagaattcttgagagttttggg
gaacaggtaactgcatcactatgtggaaaaacatgtgatgcctgcagacatgcaaactta
gttgctcgatgtttggaggatctcaaaactgtttgtgctctgcgtcataaaaatggttca
tctcgagtttttataaccagttccactgccgcaactactggagaacagttatctgaattc
tggaatcggggagaggaagcaagtggatcagaggaagatatatctgattcagaagatggt
aatgaggttatcaacaacctaaccaggtcaaagcttcaatccagattgggagtaaatgag
aagcttgctatgttacaacgggcagaagaaaacttctatagaaataataacacttatana
aatgtagttgatccaaccgatgaagttttctatcttaatgatcatggttcagaaggattt
agatacaaagatctattggatgatgcttttgctgatttatctaatacactcaaatctctg
ggagatgtctgtgcaatagtgtattgccttgaacgttcaatgtgtgatgacttatcaagt
aatctatcccaaagtggtatttcatgtgctgcttatcatgcaggattgaataataaaatg
cgaacttcggtgttagatgattggatttcttctaagataaaagttattgttgctactgtg
gcttttggcatgccattacatgttggtgtgtgctgtggggggttgatgaattttgtggcc
ctgttcatagtagtggccataagatctacggattacaatgatttctggcatgatacttgg
tgcgacatctaccaagctaaaatgctctgtgatgggacttttgtagagaccaagggccat
ggagccatgatgttactgagcctttggtcttcatttagaatgggcattgatagaaaggat
gtcagaattgtttgccatttcaatattcccaagtcaatggaagcattctatcaagagtcc
ggccgagctggtcgtgatcaattgccatctagaagtctgttgtactatgggatagacgat
cgcaaaagaatggaatttatattaagtaaatcggggagcaagaagtcatctagttcacag
gaagagtcatccaaaatatccctgattgctttcaatcagatagttgaatactgtgaagga
tctggatgccgcaggaaaagaattcttgagagttttggggaacaggtaactgcatcacta
tgtggaaaaacatgtgatgcctgcagacatgcaaacttagttgctcgatgtttggaggat
ctcaaaactgtttgtgctctgcgtcataaaaatggttcatctcgagtttttataaccagt
tccactgccgcaactactggagaacagttatctgaattctggaatcggggagaggaagca
agtggatcagaggaagatatatctgattcagaagatggtaatgaggttatcaacaaccta
accaggtcaaagcttcaatccagattgggagtaaatgagaagcttgctatgttacaacgg
gcagaagaaaacttctatagaaataataacacttataaacagaacaacaaaggtgacaag
aatgctatttcggatccaatgcgaggatcaagcaggcaaaggttacaaaatgctcttaaa
caggtccaccaacggcttgacgacttcaagattgaagtggatacgtcagcatctttcctt
gaagatgaatgctacaagaagtatggcaaggctggcaaatcattctattattcgcaagtg
gcaagtactgtaagatggctgacgactgccacctccagcgaattgatgaaccgactttgt
gcaattaatgcttctgctgaagctgaacagtcccttacgccagctgaacagcccttcaaa
ccgccacctactttagatccttgtgcagaagataccagcaatgaatactctggcaatgct
agatcagaaacttctccatgtattgtgccaatggaaagctgttcgtttaataataccaac
ttgccacaaataccatccttctctgaattcctaaatagtaggaaaacaaaaggggaccag
ttaaatgacacaaagaagcattcaagaatcgaaaagaggatgaggatgcagtaa
DBGET
integrated database retrieval system
