Vigna umbellata (ricebean): 124840436
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Entry
124840436 CDS
T09662
Name
(RefSeq) nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124840436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124840436
03036 Chromosome and associated proteins [BR:
vum03036
]
124840436
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124840436
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124840436
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
124840436
NCBI-ProteinID:
XP_047172450
LinkDB
All DBs
Position
Unknown
AA seq
1039 aa
AA seq
DB search
MFGSNPFGQSSSSPFGSQSVFGQTNSSTNPFAPKPFGSTSPFGSQTGSSMFGGTSTGVFG
AAQQSSPFASNTAFGASSSPAFGSSVPAFGSSSTPAFGSSSSSFGGSSVFGQKPAFGGFG
STPTQTSPFGATQQSQPAFGSSIFGSSTPFGGSSQPAFGATSTPAFGATSTPAFGASSTP
AFGASSTPAFGASSTPAFGATSTPAFGATSSPAFGATSTPAFGSTSSPTFGSTGSAFGVS
SAPVFGSGGAFGASSNPMFGSSSTSAFGSSSTPFGASSTPAFGASSTPAFSFGSTQAFGQ
SSSAFGSSSPFGSTASPFGGQSSAFGSQTPSSTFGNTGMGQPGFGGQQRGGSRVASYTAT
TEADSGTSGQTAKLESISAMPVYKDKSHEELRWEDYQLGDKGGPLPSGQSTGLAGFSSST
TQTNAFSPSPVFGQSSANPFSSTTPNSNPFAPKSSPFSSGFGTSAAPAFSSSAFGSSTSA
AAPSIFGSSPSPFGANSSSAPSFGQSPSLFNTAPAQTSSPFGSSIFGNTQSSPLFSSAAP
PIAQTSSAFGQNTSPFGQATPFSQSSLFNSPSSGLVGSIFSSSASLTSNNLTGFGQTAPS
ISTPFQPAQPAQSSGAFGFSNFGQTQPVGASSFGGTPGLFGQNNFGLASSTQSSVVVQAV
PNTNPFGTLPAMPQMSIGRVGTTPSIQYGISSMPALDKPAPVRISSLLTSRHLSQRRIRL
PVRKYHSKNDGPRVPFFSDDEDTTTTPKADALFIPRENPRALIISPMEQWPAKASEKGLT
FKDKSIPRNENGNISKEASVTPDRTSSQDKDNIGVENGVVKEQGQHTATKPTSNGNNEDH
SSQKADMYKTLSGHRAGEAAIVYEHGADVEALMPKLRRSDYYTLPRIHELAAKERAEPGF
CSHVKDFVVGRQGYGSIRFLGETDVRGLDLESLIQFNNREVIVYMDDSKKPPVGQGLNKP
AEVTLLNIKCFDKKTGHQYTEGPKIEKYKEMLKRKAEDQGAEFVSYDPTKGEWKIRVNHF
SVYKLLDDVNSWINHEDDN
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttcgaacccttttgggcagtcttcgtcgagccctttcggctctcaatcagtt
tttggacagaccaattcaagtaccaatccatttgcccctaagccgtttggtagtacgagt
ccatttggttcgcaaactggaagttccatgttcggaggtacttccactggggtatttggt
gcggcacaacagtcttctccctttgcttccaatacagcttttggggcttcatcgtcacct
gctttcggtagttccgtgcccgctttcgggtcttcttcaactcctgcttttggtagctca
tcatcgtcatttggtggatcatccgtttttggtcagaaacctgcttttggaggttttgga
tctactcctactcaaacaagtccatttggtgccacacagcaatcacaaccggcttttgga
agcagcatatttggttcctcaacaccttttggaggatcatctcagcctgcatttggtgct
acaagcactcctgcatttggtgctacaagcacacctgcatttggtgcttcaagcactcca
gcatttggtgcttcaagcactcctgcatttggtgcttcaagcactccagcatttggtgca
actagcacccctgcttttggtgctacaagcagccctgcatttggtgcaactagcacccct
gcatttggttccacctctagcccaacttttggtagcacagggagtgcatttggggtgtca
agtgctcccgtatttggtagtggaggagcctttggggcttcaagtaaccctatgtttggt
tcatcaagcacgtctgcatttggtagttcaagcactccatttggggcctctagtactcct
gcttttggggcctctagtacgcctgcatttagttttggatccactcaggcttttggtcag
tcttcttcagcatttggtagcagcagtccatttggtagtacagcctcacccttcggaggt
cagagttcagcatttggatctcaaactccatcatcgacctttggaaatactggtatggga
cagccaggttttggaggtcagcaacggggtggaagtagagtagctagttacacagcaaca
actgaagcagatagtggtacctctggacagactgcaaaattggaatccatatctgccatg
cctgtttacaaagacaaaagtcacgaggaactaagatgggaggactatcaattgggagac
aaaggtggaccacttccctctggtcagtctactggtttggcaggcttcagttcgtctaca
actcagacaaatgccttttctccttccccagtgtttggtcaatcatcggcaaatcctttt
tcttccacaacacctaattctaacccgtttgcgccaaagagttcccccttttcttctgga
tttggaacttctgccgctcctgccttcagttcatcagcttttggttcttcgacctcagca
gcagcaccctctatttttggctcatccccatctccatttggagctaactcttcttcagct
cccagctttgggcaatctccatccctgtttaatactgctcctgctcagacctcttcacca
tttggctcaagtatttttggcaatacacagtcatccccattatttagttctgcagcccct
ccaattgcacaaacaagttctgcttttggacagaatacctccccctttgggcaggctaca
ccttttagtcaatcaagcttgtttaattcaccttcttctggtcttgttggaagtattttc
tcgtcaagtgcatcactcacttctaataatctgaccggttttggtcaaacagcgccatcc
atttcaacaccttttcaacctgcacaacctgcacagtcgagcggtgcttttggctttagc
aactttggccagacacaacctgtgggtgcaagcagcttcggtggcactccaggcctattt
ggtcagaataattttggacttgcgtcttctacccagagttctgtggttgtacaagcagtt
ccgaatacaaatccatttggaacacttcctgcaatgcctcagatgtcaattggtcgagtt
ggaaccactccttcaattcaatatggaatctctagcatgcctgcactagacaagcctgct
cctgttagaatatcatctttattaacatctcggcatctctcacaaagacgaataaggctt
cctgtcaggaaatatcattctaagaatgatggtcctcgggttccattctttagtgatgat
gaggatactacaacgacacccaaggccgatgctctgttcattcctagggaaaatccaagg
gcgttgatcattagtcccatggagcagtggccggcaaaggcttctgagaaggggttaact
tttaaggataaatccatacccaggaatgagaacgggaatatctctaaagaggcaagtgta
acacctgatagaaccagctcacaagacaaagataatattggtgtagaaaatggtgttgtg
aaggagcaaggtcagcatacagcgacaaagccaacttccaacgggaacaatgaagatcat
tcttcacaaaaggcagacatgtacaagacactgagtggtcacagagctggcgaggctgcc
attgtgtatgagcatggggctgacgttgaggcactaatgccaaaactgcggcgatctgat
tactatacactgcctaggatacatgaactggcggccaaggaaagagccgaaccaggattc
tgcagtcatgtaaaggatttcgtggttggaaggcaaggctatggcagcatcagattcttg
ggtgaaacggatgtacgagggcttgatttggagtccctgattcagtttaacaatagggag
gtgattgtatacatggatgattcaaagaaacctcctgttggacaaggtctgaataagcct
gctgaggtcacactactcaatatcaaatgcttcgacaaaaaaactggacatcagtataca
gaaggaccaaagattgagaaatacaaggagatgctcaagagaaaggctgaggaccaaggt
gctgaatttgtatcatatgatcccactaaaggagagtggaagatcagggttaaccatttc
agcgtctacaagctgctcgatgatgtaaacagttggataaatcatgaagatgacaactaa
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integrated database retrieval system
