KEGG   Vigna umbellata (ricebean): 124840530
Entry
124840530         CDS       T09662                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase subunit alpha-like
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
vum  Vigna umbellata (ricebean)
Pathway
vum03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:vum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    124840530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vum03021]
    124840530
   03400 DNA repair and recombination proteins [BR:vum03400]
    124840530
Enzymes [BR:vum01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     124840530
Transcription machinery [BR:vum03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     124840530
DNA repair and recombination proteins [BR:vum03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      124840530
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 124840530
NCBI-ProteinID: XP_047172548
LinkDB
Position
Unknown
AA seq 175 aa
MKGQADTIGIAIRRILLGEIEGTCITRVKSEKIPHQYSTIIGIEELVHEIFMNLKEIVLK
SNMYGTQDALISFKGPXYITTQDIILSPSVEIVENRQHITNVHXPVNLCIELKIERNLGY
WIKTLKNFXDVSYDIDARFMPVRNVNYSIHSYVNGNEKQEILFLEIWTNGSLHYL
NT seq 528 nt   +upstreamnt  +downstreamnt
atgaaaggtcaagctgatacaataggcattgcaatccgaagaattttactcggagaaata
gagggaacatgtatcacacgtgtaaaatcagagaaaataccacatcaatattctaccata
ataggtattgaagaattagtacatgaaattttcatgaatttgaaagaaattgtattgaaa
agtaatatgtatggaacacaggatgcattgatttctttcaaaggtcctngatatataacc
actcaagacatcattttatcaccctcagtggaaattgttgaaaatagacaacatataacc
aatgtccatnaacctgttaatttgtgtattgaattaaaaattgagagaaatcttgggtat
tggataaaaacactaaaaaacttttaagacgtaagttatgatatagatgctagattcatg
cctgttcgaaatgtaaattatagtattcattcttatgtcaatgggaatgaaaaacaagaa
atacttttcctcgagatatggacaaacggaagtttacactacctgtga

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