Vigna umbellata (ricebean): 124840891
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Entry
124840891 CDS
T09662
Name
(RefSeq) nuclear pore complex protein NUP88
KO
K14318
nuclear pore complex protein Nup88
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124840891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124840891
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124840891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup88
Motif
Other DBs
NCBI-GeneID:
124840891
NCBI-ProteinID:
XP_047172989
LinkDB
All DBs
Position
Unknown
AA seq
797 aa
AA seq
DB search
MRIALEPSPSRSQTPKDEVEWVPLAKHPLFTAHGGATVGGYRNLLAWDGASRLYFWDTNS
RILHRLSLRLGDPDPSSVLASSPSKVLQADAELDFDVHKISVNRNGTAILLFGSETLSVM
YLYGRASKKDVNLICRTITVGSQTYSTGGNDIRVLQALWHPYSDTHLGILSSDSVFRLFN
LAVDPLQPEQEYYLQPVEPGRFRNASSVCPVDFFFGGDHLWDRFSVFVLFSNGAIYVLCP
VVPFGSLFKCESLVEIYNDAHTFGIISANPVAASNSKLAISWLEASFPELQNQDTEGDSL
SLLRAHAYSLFDASLVLQGPLQRVGQDGNGDSVGCSTECEGRAVSFLYNLVSKDSILVTA
WSGGQLQIDALADEIQPVWCVGSPPRLRVDSHDQILGLAMICESITCSSLGKVDHNAWLG
NPPPLLRLAIVDLALPRRAESGYNISLFIDMLMPERIFSLHDGGIDSIVLHFLPFTSQSN
GKDDTMKTPSVHPVLNTCQSGYTSEPSFCGFVSLSDSFGYSWIVAITLSLECVVLEMKSW
NLLLPVSIDMEKKPISSEGESKERDIPTIISKELLSGPKEVLVPHASPSLRSVAADSIEG
RSTLHQYFKLFHETYVEYGHKVYLELKHHAPQLNKIINDQHSRLGEAQQKLLNVEKKEAI
LQKRLGRAIQMHNSLEERLQQLRNLPCAHKKPLSRAERQFKSELDRFKEVELDALHSSVD
AVSARLRRHLQASKANQQQKTAGKKINAVDSQISMLKSSLEKLSLVNTENSKKVKLVEST
LKNKERSSGRESSLPLP
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcgcgttggagccgagcccaagccgctcccaaactcccaaagacgaagtggag
tgggtcccacttgccaagcaccctctcttcaccgcacacggcggcgccaccgttggtggt
taccggaatctcctggcctgggacggagcatcgcgcctctacttctgggacacgaacagc
cgcattcttcaccgcctatctctccgacttggcgaccccgatccctcttccgtcctcgcc
tcttctccctcgaaggtgttgcaagcagacgccgagctcgatttcgacgtccacaaaatc
tccgtcaacaggaacggaacagcgatacttcttttcggttccgaaacgctctctgttatg
tatctttacggacgcgcatctaagaaggacgtgaacttgatttgcaggactattactgtt
ggttctcagacatattccactggtggcaatgatattcgggtgttacaagcattatggcac
ccttacagtgatactcatttggggattctttcttctgactcagttttcagacttttcaac
cttgctgtggatcctttgcaaccagagcaagaatattatttacagcctgtcgagcctggt
agatttagaaatgcctcatcagtttgcccagttgattttttttttgggggtgaccattta
tgggacaggttcagtgtatttgttttgttcagtaatggggctatctatgtactttgccca
gttgtgccatttggaagtctcttcaaatgtgagtctttggtagaaatatacaatgatgct
cacacatttggaataatatcagccaaccctgttgctgcgagtaattcaaagttggcaatt
tcctggttagaagcatcatttcctgagttacagaaccaagatactgaaggagacagcctg
tccttgctaagagctcatgcttattctttgtttgatgcttctcttgtcttgcagggacct
ctgcaaagagtaggtcaggatggaaatggagattcagtaggttgtagtacagaatgtgaa
ggtcgtgcagttagttttctctacaatttagtcagcaaagactcaattttggttactgcc
tggagtggtgggcaattgcaaatagatgctcttgccgatgagatccaacctgtctggtgt
gttggtagtccgcctcgtctccgtgttgattcccatgaccaaattcttggccttgctatg
atttgtgagtcaattacctgcagcagtttggggaaggttgatcataatgcctggttgggt
aatccaccccctttgctgagactggctattgttgatttggctctaccacgaagagcagaa
agtggttataatatttctttgttcattgatatgcttatgccagaaagaatattttccctt
catgatggagggattgactcgatagttttacattttcttccttttacaagtcagtcgaat
ggcaaggatgatacaatgaagacaccgtctgtgcaccctgtgttaaatacttgccagagt
ggatacacctcagaaccctcattttgtggctttgtgtctttatcggattcatttggatat
tcatggattgtagctattacactttctcttgagtgtgttgtgcttgagatgaaaagttgg
aatctcttgcttcctgtaagcattgatatggagaagaaacccatttcatcagagggggaa
tcaaaggagagggatataccaacaataattagcaaagaactacttagtggaccgaaggag
gtacttgttccccatgcctctccaagtttgcgttctgttgcagctgattcaattgaaggt
cgatcaacattacatcagtatttcaagctgtttcatgaaacttatgtggagtatggacat
aaggtgtacctggagctcaagcatcacgcacctcagttgaataaaatcattaatgaccaa
cattctcgcttaggcgaagcacagcagaaacttttgaacgttgagaagaaagaggctata
ttacagaaaaggttaggtcgtgctattcaaatgcacaattctttggaagagcgcttgcaa
caattaaggaacttaccttgtgctcacaaaaaaccgctgtccagagcagagcggcagttt
aaatcggagcttgaccgctttaaggaagttgagttggatgctttgcattcttctgttgat
gcggtaagtgcaaggctgagaaggcacttgcaagcttcgaaagctaatcagcaacagaaa
acagctgggaagaaaattaatgctgtagacagtcagatatccatgctcaaatcgtctctt
gaaaaactctcactggtaaatactgagaattcaaagaaagttaaacttgtggagtctaca
ttgaaaaacaaagaaagaagtagcggcagagaatcaagcctgcctttgccctaa
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