KEGG   Vigna umbellata (ricebean): 124840928
Entry
124840928         CDS       T09662                                 
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
vum  Vigna umbellata (ricebean)
Pathway
vum03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    124840928
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vum03019]
    124840928
Messenger RNA biogenesis [BR:vum03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     124840928
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     124840928
SSDB
Motif
Pfam: EXOSC1 ECR1_N ECR1_N_2 RRP4_S1
Other DBs
NCBI-GeneID: 124840928
NCBI-ProteinID: XP_047173024
LinkDB
Position
Unknown
AA seq 197 aa
MEEEKEAVMVTPGEVLGRSSDVKAGRGAYAAPHNNTVYASLTGFHRTIPPPPDSPDKRPT
VEVTGHKAHGPVPQPGSVVIVRVTKVMARSASADIMCVGSKCVREKFTGIIRQQDVRATE
IDKVDMHLSFHPGDIVKALVLSLGDARAYFLSTAKNELGVVSAESIAGATMVPVSWTEMQ
CPVTGQIEQRKVAKAAS
NT seq 594 nt   +upstreamnt  +downstreamnt
atggaagaagagaaagaagcagtgatggtaacaccaggagaagtgttgggaagaagcagc
gatgtcaaagctgggagaggagcatacgcagcgcctcacaacaacaccgtttacgcctcc
ctaaccggcttccaccgtaccattcctccgccgccggactctcctgacaagaggccgact
gttgaagtaactggtcacaaggcgcatggacctgttccacagcctggatctgttgtcatt
gtgcgggtcaccaaagtaatggctcggtccgcttctgctgatattatgtgtgttggatct
aagtgtgttcgagaaaaatttaccggcattatcagacagcaagatgttagagctactgaa
attgataaagtagacatgcacctgtcttttcatcccggtgatattgttaaagctcttgtg
ctttctcttggagatgcacgggcctactttctgtctactgcaaagaatgaacttggtgtt
gtttctgctgaaagcattgctggtgcaaccatggttccagttagttggactgagatgcag
tgccctgtaactggacaaattgagcaaagaaaggttgcaaaggctgcaagctga

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