Vigna umbellata (ricebean): 124840952
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Entry
124840952 CDS
T09662
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124840952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vum04121
]
124840952
Enzymes [BR:
vum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124840952
Ubiquitin system [BR:
vum04121
]
Ubiquitin ligases (E3)
HECT type E3
124840952
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
TFIIA
Motif
Other DBs
NCBI-GeneID:
124840952
NCBI-ProteinID:
XP_047173056
LinkDB
All DBs
Position
Unknown
AA seq
1720 aa
AA seq
DB search
MICFPSSAMGSASSSHQNGRLKKILFWVLRAEGEEGRQVEALTQLCEMLSIGTEESLSTF
SVDSFVPVLVGLLNHENNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSIFCARLLTIE
YMDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPS
DASDFVMEAVPLLTNLLHYHDAKVLEHASVCLTRIAEAFASSPDKLDELCNHGLVTQAAS
LISNSSSGGGQASLSTPTYTGLIRLLSTCASGSPLGAKTLLLLGISGILKDILSGSGVSS
NASVSPALSRPPEQIFEIVNLANELLPPLPQGTISLPIISNMFMKGPIIRKSPAGSSGKQ
EDSNGNVTEISAREKLLNDQPELLKQFAMDLLPVLIQIYGSSVNGPVRHKCLFVIGKLMY
FSTAEMIQSLLSVTNISSFLAGVLAWKDPHVLIPALKIAEILMEKLPGTFSKMFIREGVV
HAVDQLILPTNSTNISTQASSAEKDNDSISGASSRSRRYRRRSGSSNPDGNPLDDLKAPV
SVNVGSPPSSVDIPTVNSSIRMSVSAAAKAFKDKYFPSDAGASEVGITDDLLNLKNLCMK
LNTDANEERTSGKGKSKSSGFVLEEYLIGVIADMLKELGKGDGVSTFEFIGSGVVAALLN
YFSCGYFSKEKSLETCLPHLRQQALTRFKLFIAVALPPSTEVGTVPPMTVLVQKLQNALS
SLERFPVVLSHSSRSSSGSTRLSSGLSALSHPFKLRLCRAQGEKSLKDYSSNVVLVDPLA
SLAAIEEFLWSRIQRSESGQKSTVPAGHSESTPGAGVSTPSSTRRHSTRSRSSVNIGDTS
RKQVFQDKSTSSSKSKGKAVLKPAQEESRGPQTRNATRRRAALDKDAQAKPVNGDSTSED
EDLDISPVEIDEALVIEDDDISDDEDDDHEDVLRDDSLPLVCSPDKVHDVKLGDLAEEST
VAPATTDGQTNAASGSSSKTGTVRGSDSTDFSSGYTSSSRGAMSFAAAAMAGLGSANNRG
LRGGRDRLGRPLFGSSNDPPKLIFTAGGKLLNRHLTIYQAIQRQLVHDEDDDERLAGSND
YVSGDGSRLWGDIYTITYQRSENQTDRTTPGGSSSNASKSGKSGSASNSGSEAKLHQTSV
LDSILQGELPCELEKSNPTYNILALLRVLEGLNQLAPRLRAQVATDYFAEGKILDLDELS
VSIGARVPAEEFISGKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYF
YSTAFGLSRALYRLQQQQGADGHGSTNEREIRVGRLQRQKVRVSRNRILDSAAKVMELYS
SQKAVLEVEYFGEVGTGLGPTLEFYTLLSHDLQRVGLRMWRSGSSDKYSMEIDGNERKMK
SSDGSSAGDGELVQASLGLFPRPWPANADSSEGTPFSRVIEYFRLLGRVMAKALQDGRLL
DLPLSAAFYKLVLGQDLDLHDILFIDAELGKTLQELNALVCRKRYIESFGGSYTDKIGNL
QFRGAQIEDLCFDTTLPGYPEYILKPGDEIVDINNLEEYISMVVEATVKTGILRQMEAFR
AGFNQVFEISSLQIFTPQELDYLLCGRRELWKTETLADHIKFDHGYTAKSPAIVNLLEIM
GEFTPEQQRAFCQFVTGAPRLPSGGLAVLNPKLTIVRKLSSSAANASSNGNGPSELADDD
LPSVMTCANYLKLPPYSTKEIMYKKLLYAINEGQGSFDLS
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atgatctgcttcccatcttctgccatgggttctgcatcttcctctcaccagaacgggagg
ctgaaaaagatccttttttgggttttgcgagcggagggcgaagaagggcggcaggttgaa
gcgctgacgcaactctgtgaaatgctttcaattgggactgaagaatcgcttagtacattc
tcagttgattcgtttgttcctgtgcttgtgggtttgttgaatcacgagaacaatcccgac
atcatgcttcttgctgcaagagcattaacccatctctgcgacgtgctaccttcatcttgt
gctgcggttgttcattatggtgcagtttcaattttctgtgcgaggttgctcaccatagaa
tacatggacttggctgagcagtcccttcaagctctgaagaagatatctcaggagcatccc
actgcctgcctacgagcaggtgctcttatggccgtgctttcttatttggacttcttttct
acaggagttcagcgggttgcattgtctactgctgcaaatatgtgcaagaaacttccttca
gatgcgtctgattttgtgatggaagctgttcctcttctcacaaaccttcttcattaccat
gatgccaaggttctagagcatgcctctgtttgtttgactcgaatagctgaagcgtttgcg
tcatcacctgacaaattagatgaattgtgcaaccatggactggtaacacaagctgcctcc
ctcatctctaacagcagttctggaggtggtcaggcttctctcagcacaccgacatatacg
ggtttaatccgacttctttcaacttgtgcgagtggatcgcctcttggagctaaaacttta
ctactactcggaattagtggtattcttaaagatattctatctggttctggagtttcttct
aatgcctctgtttctcctgcattaagtaggcccccggagcagatatttgagattgtaaac
ctggcaaatgagcttcttcccccattgccacaaggaacaatttctctccctatcatctcc
aacatgtttatgaaagggcccattataaggaagtctcccgctggtagctctggaaaacaa
gaagattcaaatggaaatgttactgagatatcagcccgtgagaaactattaaatgaccag
cctgaacttcttaagcaatttgctatggatcttctaccagttttaatacagatatatggt
tctagtgtcaatggtcctgttcggcacaaatgtctttttgtcattggaaaattgatgtat
ttcagcacagcggagatgatccagtctttgttgagtgtgaccaatatatcaagtttctta
gctggggtcctagcatggaaagatccacatgtgttgattcctgccttgaaaattgctgaa
attcttatggaaaagcttcctgggacattctccaagatgttcatcagagaaggtgttgtg
catgcagtggaccaacttattttacccacaaattcaaccaatatctctactcaggcatct
tctgctgaaaaggataacgattctatatctggagcatcatctcgctctaggcgttatcgg
cgacgcagtggaagctccaatcctgatggtaatcctttggatgatttgaaggctcctgtt
tcagtgaatgtcggctcacctccaagttctgtggatattccaacagtaaattccagtatt
cgcatgtctgttagtgcagccgcaaaggcttttaaagataagtactttccttcggatgct
ggggcgtctgaagtgggtattactgatgatcttttgaatctgaaaaatctttgcatgaag
ctaaatacagatgcgaatgaagaaaggaccagtggaaaggggaaatctaaatcttctgga
tttgttctagaagagtatttaattggggtcatagctgacatgctaaaggaacttggcaaa
ggtgatggtgtatctacatttgaatttattggcagtggtgttgttgcagctttgttgaat
tatttttcctgtgggtacttctctaaagagaaatccttagaaacctgcttaccacacctt
cgccagcaagcacttacaaggtttaagttatttatagctgttgcactacctccctcaact
gaagttgggactgtgcctcctatgaccgttttggttcaaaagcttcaaaatgccttgtcc
tcattggaacgtttccctgttgtgctgagtcattcatccaggtcatctagtgggagtaca
cgcctctcctctggactaagtgcattatctcatcccttcaagttgcggctttgtcgagcc
cagggtgaaaagtcacttaaggattattcatcaaatgttgtattggttgacccattagca
agtttagcagccattgaagaatttctttggtctcgtatccaacgaagtgaatctggtcag
aagtccactgtacctgctggtcattctgaatcaactccaggagctggtgtatccactcct
tcctctacccgtcgtcattctactagatccagatcatctgttaatataggtgacacatct
agaaagcaagtatttcaagataaaagcactagctcttctaagagtaagggaaaagctgta
ttaaagcctgcgcaagaggagtcaagaggacctcagaccaggaatgctactcgcagaaga
gcagctcttgataaagatgctcaagcaaagcctgtaaatggtgactctacttctgaggat
gaagatttggatatatctcctgttgagattgatgaggcattggtgattgaagatgatgat
atttctgatgatgaagatgatgaccatgaagatgttctgagggatgattctcttcctttg
gtgtgctctcctgacaaagtacatgatgtgaaattgggtgatctggccgaggaaagtact
gttgctcctgcgacaactgacggccagactaatgctgcttcaggttctagcagcaaaact
ggtaccgtgaggggatcagactctactgattttagtagtggctatacatcaagctcaaga
ggtgcaatgtcatttgctgctgctgccatggctggacttggttctgccaataacagaggt
ttaagggggggaagagatcgactagggcgtccattatttggtagttctaatgatcctcca
aagttgatctttaccgctggtgggaagctgcttaataggcatttgactatatatcaggca
attcaaagacagcttgtgcatgatgaagatgatgacgagagattggctggcagtaatgac
tatgtatccggtgatggaagcaggttgtggggtgatatttatactataacttatcagagg
tcagagaaccaaacagataggactacccctggaggttcaagctctaatgcttccaaatct
ggcaaatctggatctgcatcaaattctggttctgaagccaagctacatcagacatctgta
ttagatagcatcttgcagggtgaattgccctgtgaattggagaaatctaatcctacatac
aatatattagcactattgcgggtgctagagggtttgaaccaacttgcccctcgattgagg
gcccaagtggctactgattactttgcagagggtaagattttggatttagatgagctaagt
gttagcattggtgctagggttcctgcagaggaatttataagcggcaaacttactccaaaa
ttagctaggcaaatacaagatgcccttgccttatgtagtgggagtcttccttcatggtgt
taccagctaactaaagcatgccctttcttgtttccttttgagacccggagacagtacttc
tattcaactgcctttgggttatctcgtgcactgtatcgtcttcaacagcagcagggtgct
gatggtcatggatcaacaaatgaaagagagatcagggttggtagattgcagcggcaaaag
gttcgtgtatctcgaaaccgcattttggattctgctgccaaagtgatggagttgtattct
agtcaaaaggcagtacttgaagtagaatattttggtgaagttggcactggtctgggtccc
accttggagttctacacacttctcagtcatgacttacaaagagttggacttcgaatgtgg
agatcaggttcttcagataaatattcaatggaaattgatggaaatgaaaggaaaatgaaa
agtagcgatggctcttctgctggagatggagaacttgttcaggcttctcttgggctgttt
cctcgaccatggcctgcaaatgctgattcatctgagggtaccccattttctagagttatt
gaatatttccggctattaggtcgtgtaatggctaaagctctccaagatggacgcctattg
gatttaccactttcagcggcattttataagcttgttcttggtcaagatcttgatttgcat
gacattcttttcattgatgctgagcttgggaaaactttacaagagttaaatgcccttgtt
tgccgaaaacgatatatcgaatcttttggtggttcctatactgataaaattggtaattta
caatttcgtggggctcaaattgaagatctctgctttgacactactcttcctggctatcca
gagtacatcttgaaacctggagatgaaattgttgacatcaataatctagaggagtacata
tccatggtggtcgaggcaactgttaagactggaatcttgcgtcagatggaagcatttagg
gcagggttcaatcaggtttttgaaatctcatctttgcaaatttttactccccaagaactg
gattatttgctttgcggccgtagagaattgtggaagactgagacacttgctgatcatata
aaatttgaccatggttatactgccaagagcccagccatagttaatttactagaaatcatg
ggagaattcacaccagaacagcagcgagccttctgtcaatttgttactggtgcacctaga
cttccatctggtggactggcagttctaaatccaaaactaacaattgtgaggaagctttcg
tcaagtgcagctaatgcttcatctaatgggaacgggccttcagaattagcagatgatgac
ttgcccagtgtgatgacgtgtgcaaattacctgaaacttcctccttattctaccaaggaa
attatgtacaagaagctactctatgcaatcaatgaaggccagggatcctttgatttatca
tga
DBGET
integrated database retrieval system
