Vigna umbellata (ricebean): 124840957
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Entry
124840957 CDS
T09662
Name
(RefSeq) WD-40 repeat-containing protein MSI2-like
KO
K10752
histone-binding protein RBBP4
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03082
ATP-dependent chromatin remodeling
vum03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124840957
03083 Polycomb repressive complex
124840957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vum03036
]
124840957
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
124840957
Histone modification proteins
HAT complexes
HATB complex
124840957
HDAC complexes
Sin3A-HDAC complex
124840957
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
124840957
PRC2.2
124840957
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
124840957
Heterochromatin formation proteins
Other heterochromatin formation proteins
124840957
Chromatin remodeling factors
NuRD complex
124840957
NuRF complex
124840957
NuRF complex (fruit fly)
124840957
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
WD_LRWD1
Beta-prop_WDR75_1st
MIOS_WD40
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
eIF2A
WD40_RFWD3
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
124840957
NCBI-ProteinID:
XP_047173067
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MAEEYNEGEVEEEFSVWKKNTPLLYDLFISHPLQWPSLTVHWLPSSPQPHSHPSFNVHKL
LLATHTAQGEPNFLMLADASLPADTSQPIVAADPADPVLPKVEISQKVAVDGEVNRARCM
PQNPAIVAAKTCNSEVYVFDFNKQRGSEFAPDSRLRGHDKEGYGLSWSPFKSGYLLSGSH
DHKICLWDVPAASQESVIDAVHVYEGHESVVEDVSWNMKDENLFGSVGDDFKLVIWDLRT
NKPQQSVKPHDNEVNFLSFSPYNQWILATASSDTSVGLFDIRKLEIPLHFLSSHTDEVFQ
VEWDPNHETVLASSGADRRLMVWDLSRIGDEQIEGDGEGGPTELLFSHGGHKGKISDFSW
NKSQPWVISSVAEDNSFHVWQMAENIYSDGDDDNMWTAND
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagagtataatgaaggtgaagttgaagaagagttctccgtttggaagaagaac
actcctctgttgtacgatttgttcatttctcatcctcttcaatggccctctctcactgtt
cactggcttccttcctctccccaaccccactcccacccttccttcaatgtccacaaactc
ctcctcgctactcacactgcccagggcgaacccaatttcctcatgctcgccgacgcatcc
ctccccgccgacacctcgcaacccatcgttgccgccgaccctgccgacccggttctaccc
aaggtagaaatttcccaaaaggttgctgttgacggggaggtgaatcgagcgcgttgtatg
ccgcagaaccctgctattgttgctgcgaagacatgtaattccgaggtttatgtgtttgat
ttcaacaagcagcgtgggagcgagtttgcccctgattcgaggttaaggggtcatgataaa
gagggctatggtttgtcttggagccctttcaagagtgggtatcttttgagtggttcgcat
gaccataagatttgcttgtgggacgtgcctgctgcttctcaagagagtgtgattgatgca
gttcatgtttacgagggtcatgagagtgtggttgaagatgtgtcctggaatatgaaggac
gagaatctgtttggatctgtaggagatgactttaaattggtcatttgggacttacggact
aacaaaccccaacaatcagtcaaaccacatgataacgaggttaactttctttcattcagt
ccatataaccaatggattttggctacagcatcttcagatacaagtgttggtctatttgac
attcggaagctggaaattccactacattttttaagtagccacaccgatgaagtattccag
gttgagtgggatcctaatcacgagactgtgttggcatcatctggcgctgacagacggctg
atggtttgggatcttagcaggatcggagatgagcagatagagggagatggtgagggtggc
cccaccgaattactcttctctcacgggggtcacaaagggaaaatatcagatttttcatgg
aacaaaagtcagccatgggttatctcaagtgtagctgaggacaattctttccatgtatgg
caaatggcagagaacatttacagtgacggcgacgatgacaacatgtggacggccaatgat
taa
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integrated database retrieval system
