Vigna umbellata (ricebean): 124841033
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Entry
124841033 CDS
T09662
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
124841033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vum03400
]
124841033
DNA repair and recombination proteins [BR:
vum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
124841033
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
NYD-SP28
Motif
Other DBs
NCBI-GeneID:
124841033
NCBI-ProteinID:
XP_047173153
LinkDB
All DBs
Position
Unknown
AA seq
814 aa
AA seq
DB search
MAENFDDLTNKLPELKLDSKQAQGFLSFFKTLPDDPRAIRLFDRRDYYTAHGDNATFIAK
TYYHTTTAMRQLGNGSNALSSVSVSRNMFETIARDLLLDRTDHSLELYEGSGSNWRLVKS
GTPGNIGSFEDVLFANSEMQDSPVIVALSLNFRENGCTIGLGFVDLTKRVLGMAEFLDCH
FTNVEAALVALGCKECLLPIESVKSTEYRMLRDVLTKCGVMLTEKKKYEFRARDLVQDLC
RLVKGPIEPVRDFVSGFEYAPGALGALLSYAELLADESNYENYTLRRYNLDSYMRLDSAA
MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHIWLKQPLVDVAEINSRLDIVQAF
VEDTVLRQDLRQHLKRISDIERLMHNLQKRRAGLQHIVKLYQSSIRLPFIKRALEIYDGQ
FSSVMRSRYLEPLQFLTDDEHLNKFIGLVEVSVDLDQLENREYMISPSYDSTLANLKEQR
ELLESQIHNLHRQTADDLDLPIDKALKLDKGTQFGHVFRITKKEEPKIRKKLNTQFIVLE
TRKDGVKFTNTKLKKLGDKYQQILEEYKNCQKKLVDKVVQTATTFSQVFESLAEIISELD
VLLSFADLASSCPTPYTRPDITPADEGDIILEGCRHPCVEAQDWVNFIPNDCKLVREKTW
FEIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDKASISVRDCIFARVGAGDCQLRGVS
TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHIVEVIKAPTLFATH
FHELTALALENVSNDPQKQIVGVANYHVSAHIDS
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaatttcgacgacctaaccaataagcttcctgagctcaaattagattctaag
caagcgcaagggtttctatcatttttcaaaaccctacctgatgatccaagggctatacgg
ctttttgatcgtagggactattatactgcccatggcgacaatgcaactttcattgcaaag
acctactaccacactacgactgccatgcgacaactgggcaatggatcaaatgctctttcc
agtgttagtgtcagcagaaacatgtttgaaacaattgctcgtgatctccttttggataga
acagaccattctctcgagctctatgaaggtagtggttctaattggagactggtcaaaagt
ggaacgcctggtaatattggtagttttgaagatgttctgtttgctaacagtgaaatgcaa
gattctccagttattgttgctttgtcacttaacttccgtgaaaatggttgcaccattggg
ttaggatttgttgatctaactaagagagtgcttgggatggctgaattccttgactgtcac
ttcacaaatgtggaagcagcattggttgcacttggttgcaaagaatgtcttcttcccata
gagtctgtcaaatctactgaatacagaatgttgcgggatgtgttgactaaatgtggtgtg
atgttaaccgagaaaaagaaatatgaatttagagccagggatcttgtgcaggatctttgc
aggcttgttaaaggtcctatcgaaccagttcgagattttgtgtctggatttgaatatgca
cctggtgctctgggggcattactatcttatgcagagttactggcagatgaaagcaattat
gaaaactatacccttcgtaggtacaatcttgacagctatatgaggttagactctgcagcc
atgagagcacttaatgtcctggaaagcaaaactgatgcaaacaaaaatttcagtttgttt
ggtctcatgaacaggacttgtactgctggaatgggaaaacggctattgcacatctggctt
aaacagccattagtagatgtggcagaaattaattctaggttggacatagtacaagcattt
gtagaggacactgtgcttcggcaagatctgaggcagcatctgaaaagaatatcagacatt
gaacgactgatgcacaatctgcagaagcgacgagctggtctgcaacatattgttaaactt
tatcagtcaagtattcgactacctttcattaaaagagctttagaaatatatgatgggcag
ttttcctcagtgatgaggagtaggtatttggaacctcttcagtttttgactgatgatgag
cacttgaacaaattcattgggcttgtagaagtttctgttgaccttgatcaactggagaac
agggaatacatgatttctccaagctatgactctacactagctaacctaaaggaacaacga
gaattactagagagccaaatacataacttgcatagacaaactgctgatgatcttgatctg
cctatagataaggcattaaagttagacaaagggacacaatttggacatgttttcagaatc
acaaagaaggaagagccaaagataaggaagaagctcaatacccagtttattgtattggaa
acccggaaagatggagtgaaatttaccaacacgaagctcaaaaagctaggggataagtat
caacaaattcttgaggagtataaaaattgtcaaaagaagttagtggataaggtagttcaa
acagcgacaaccttttctcaggtgtttgaatctttggccgaaataatctctgaattggat
gtattactgagttttgctgatctagcttctagttgccctactccctacacaaggcctgat
atcactccagcggatgaaggagatattatcttagaaggctgcagacacccttgtgtggaa
gcccaagactgggtgaattttataccaaatgattgtaagcttgtcagagaaaaaacttgg
tttgaaataataacggggcctaacatgggtggtaaatcaacattcatccggcaggtgggt
gtgaatattttgatggcacaagttggttcatttgttccttgtgacaaagccagcatatct
gttcgtgattgtatttttgctcgtgtgggtgctggtgactgccaactacgtggtgtttct
accttcatgcaagagatgcttgaaactgcatcaatattaaaaggagcaactgaaaagtct
ttgataatcattgatgagttggggcgtgggacatcaacttatgatggatttggtctagct
tgggccatttgtgagcatattgttgaagttatcaaagctcctactttgtttgccacccac
tttcacgagctgactgctttagcccttgaaaatgtaagcaacgatccacagaagcaaatt
gttggcgtggcaaactatcatgttagtgcgcatattgactcataa
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