KEGG   Vigna umbellata (ricebean): 124841033
Entry
124841033         CDS       T09662                                 
Name
(RefSeq) DNA mismatch repair protein MSH2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
vum  Vigna umbellata (ricebean)
Pathway
vum03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    124841033
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vum03400]
    124841033
DNA repair and recombination proteins [BR:vum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     124841033
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II MutS_I NYD-SP28
Other DBs
NCBI-GeneID: 124841033
NCBI-ProteinID: XP_047173153
LinkDB
Position
Unknown
AA seq 814 aa
MAENFDDLTNKLPELKLDSKQAQGFLSFFKTLPDDPRAIRLFDRRDYYTAHGDNATFIAK
TYYHTTTAMRQLGNGSNALSSVSVSRNMFETIARDLLLDRTDHSLELYEGSGSNWRLVKS
GTPGNIGSFEDVLFANSEMQDSPVIVALSLNFRENGCTIGLGFVDLTKRVLGMAEFLDCH
FTNVEAALVALGCKECLLPIESVKSTEYRMLRDVLTKCGVMLTEKKKYEFRARDLVQDLC
RLVKGPIEPVRDFVSGFEYAPGALGALLSYAELLADESNYENYTLRRYNLDSYMRLDSAA
MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHIWLKQPLVDVAEINSRLDIVQAF
VEDTVLRQDLRQHLKRISDIERLMHNLQKRRAGLQHIVKLYQSSIRLPFIKRALEIYDGQ
FSSVMRSRYLEPLQFLTDDEHLNKFIGLVEVSVDLDQLENREYMISPSYDSTLANLKEQR
ELLESQIHNLHRQTADDLDLPIDKALKLDKGTQFGHVFRITKKEEPKIRKKLNTQFIVLE
TRKDGVKFTNTKLKKLGDKYQQILEEYKNCQKKLVDKVVQTATTFSQVFESLAEIISELD
VLLSFADLASSCPTPYTRPDITPADEGDIILEGCRHPCVEAQDWVNFIPNDCKLVREKTW
FEIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDKASISVRDCIFARVGAGDCQLRGVS
TFMQEMLETASILKGATEKSLIIIDELGRGTSTYDGFGLAWAICEHIVEVIKAPTLFATH
FHELTALALENVSNDPQKQIVGVANYHVSAHIDS
NT seq 2445 nt   +upstreamnt  +downstreamnt
atggctgaaaatttcgacgacctaaccaataagcttcctgagctcaaattagattctaag
caagcgcaagggtttctatcatttttcaaaaccctacctgatgatccaagggctatacgg
ctttttgatcgtagggactattatactgcccatggcgacaatgcaactttcattgcaaag
acctactaccacactacgactgccatgcgacaactgggcaatggatcaaatgctctttcc
agtgttagtgtcagcagaaacatgtttgaaacaattgctcgtgatctccttttggataga
acagaccattctctcgagctctatgaaggtagtggttctaattggagactggtcaaaagt
ggaacgcctggtaatattggtagttttgaagatgttctgtttgctaacagtgaaatgcaa
gattctccagttattgttgctttgtcacttaacttccgtgaaaatggttgcaccattggg
ttaggatttgttgatctaactaagagagtgcttgggatggctgaattccttgactgtcac
ttcacaaatgtggaagcagcattggttgcacttggttgcaaagaatgtcttcttcccata
gagtctgtcaaatctactgaatacagaatgttgcgggatgtgttgactaaatgtggtgtg
atgttaaccgagaaaaagaaatatgaatttagagccagggatcttgtgcaggatctttgc
aggcttgttaaaggtcctatcgaaccagttcgagattttgtgtctggatttgaatatgca
cctggtgctctgggggcattactatcttatgcagagttactggcagatgaaagcaattat
gaaaactatacccttcgtaggtacaatcttgacagctatatgaggttagactctgcagcc
atgagagcacttaatgtcctggaaagcaaaactgatgcaaacaaaaatttcagtttgttt
ggtctcatgaacaggacttgtactgctggaatgggaaaacggctattgcacatctggctt
aaacagccattagtagatgtggcagaaattaattctaggttggacatagtacaagcattt
gtagaggacactgtgcttcggcaagatctgaggcagcatctgaaaagaatatcagacatt
gaacgactgatgcacaatctgcagaagcgacgagctggtctgcaacatattgttaaactt
tatcagtcaagtattcgactacctttcattaaaagagctttagaaatatatgatgggcag
ttttcctcagtgatgaggagtaggtatttggaacctcttcagtttttgactgatgatgag
cacttgaacaaattcattgggcttgtagaagtttctgttgaccttgatcaactggagaac
agggaatacatgatttctccaagctatgactctacactagctaacctaaaggaacaacga
gaattactagagagccaaatacataacttgcatagacaaactgctgatgatcttgatctg
cctatagataaggcattaaagttagacaaagggacacaatttggacatgttttcagaatc
acaaagaaggaagagccaaagataaggaagaagctcaatacccagtttattgtattggaa
acccggaaagatggagtgaaatttaccaacacgaagctcaaaaagctaggggataagtat
caacaaattcttgaggagtataaaaattgtcaaaagaagttagtggataaggtagttcaa
acagcgacaaccttttctcaggtgtttgaatctttggccgaaataatctctgaattggat
gtattactgagttttgctgatctagcttctagttgccctactccctacacaaggcctgat
atcactccagcggatgaaggagatattatcttagaaggctgcagacacccttgtgtggaa
gcccaagactgggtgaattttataccaaatgattgtaagcttgtcagagaaaaaacttgg
tttgaaataataacggggcctaacatgggtggtaaatcaacattcatccggcaggtgggt
gtgaatattttgatggcacaagttggttcatttgttccttgtgacaaagccagcatatct
gttcgtgattgtatttttgctcgtgtgggtgctggtgactgccaactacgtggtgtttct
accttcatgcaagagatgcttgaaactgcatcaatattaaaaggagcaactgaaaagtct
ttgataatcattgatgagttggggcgtgggacatcaacttatgatggatttggtctagct
tgggccatttgtgagcatattgttgaagttatcaaagctcctactttgtttgccacccac
tttcacgagctgactgctttagcccttgaaaatgtaagcaacgatccacagaagcaaatt
gttggcgtggcaaactatcatgttagtgcgcatattgactcataa

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