Vigna umbellata (ricebean): 124841036
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Entry
124841036 CDS
T09662
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124841036
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vum01002
]
124841036
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vum03021
]
124841036
03036 Chromosome and associated proteins [BR:
vum03036
]
124841036
Peptidases and inhibitors [BR:
vum01002
]
Metallo peptidases
Family M1
124841036
Transcription machinery [BR:
vum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124841036
Coactivators
SAGA/TFTC/STAGA complex
124841036
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
124841036
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF2_3rd
TPR_TAF2_C
Peptidase_M1
HEAT_2
Peptidase_M1_N
zf-HC5HC2H_2
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
124841036
NCBI-ProteinID:
XP_047173157
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MAKPRKTKNNEDPKPENSGALVHHQKLCLSIDIDKRLVHGYTELEIAVPEIGIVGLHAEN
LGIESVWVDGEPTEFEYYPHQQQQVEDDKRFSSVCSPSSAADAAVSVYMSSLEKELVPNL
LINCCKPSKTESEQQQEQPVPENGFHSTAEPKQNVRIVRIDYWIEKAETGIHFRNNLLHT
DNQIRRARCWFPCIDDNSQRCCYDLEFTVAHNLVAVSTGFLLYQVLSKDNPPRKTYVYKL
DVPVAARWISLAVAPFEILPDHQFSLISHMCLMPNLSKMRNTVEFFHSAFSCYKDYLAVD
FPFDSYTQVFIEPETAVSSLSLGASMSIFSSQVLFDEKVIDQTIDTRAKLAYALARQWFG
VYITPETPNDEWLLDGLAGFLTDFYIKKHLGNNEARYRRYKANCAVCKVDNGGATALSCS
ASCKDLYGTQCIGLYGKIRSWKSVAVLQMLEKQMGPESFRRILQTIVSRAQDKTRSMKTL
STKEFRHFANKVGNLERPFLKDFFPRWVGSCGCPVLRMGFSYNKRKNMVELAVLRGCTAL
QTSTTSTLDINPETENRDGDTGWPGMMSIRVYELEGMYDHPILPMAGEAWQLLEIQCHSK
LAARRFQKPKKGLKHDGSDDNGDVPSMDVRSNTESPLLWIRADPDMEYLAEVHFNQPVQM
WINQLEKDKDVIAQAQAIAALKASPQLSFSIVNALNNFLGDSKAFWRVRIEAAFALANSA
SEETDFSGLLHLVKFYKSRRFDPDIGLPKPNDFHDFAEYFVLEAIPHAVAMVRAADKKSP
REAIEFVLQLLKVIVYVRLCFISCIISVRICVLLFTYLVDYNYNI
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacctcgcaagaccaagaacaacgaagaccccaagcccgaaaactctggtgcc
ctagttcaccaccagaagctatgtctctcaattgacatcgacaaacgcctagtccacggg
tacactgaattggagattgcggtgccggagattgggatcgtagggttgcacgcggagaat
ttagggattgagagtgtttgggtcgatggtgagcccacggagttcgagtattacccgcat
cagcagcagcaggtggaagatgataagaggtttagttctgtgtgttctcctagctctgct
gccgatgctgctgtctcagtgtacatgtcctctctggagaaggagctggttcccaattta
cttattaactgctgtaaaccttccaagactgaaagtgaacaacagcaggagcaaccagtt
cccgagaacgggtttcactccacggccgagcccaaacagaatgtgagaattgttcgtatt
gactattggatagaaaaggcagagacaggaatccacttcagaaataatcttcttcatact
gataatcagataaggagagctagatgttggttcccctgtatagatgacaattcacaacga
tgctgctatgacctggagttcaccgtagcacacaatcttgtggctgttagtacgggattc
ttgctttatcaggtcttaagcaaggacaatcctcctaggaaaacatatgtttataaattg
gatgttccagtagctgcaaggtggatatctttggctgttgccccatttgaaattcttcct
gatcaccaatttagtctcatatcacacatgtgcttgatgcctaatctgtcaaagatgcgg
aatacagtggaatttttccacagtgccttcagctgctataaggattatcttgctgtagac
ttcccatttgactcatacacgcaagttttcatagagccagagacggctgtgtcttcactg
agtttaggggcctctatgagtatatttagttcacaagttttgtttgatgagaaggttatt
gatcagactattgatacaagggcaaaacttgcatatgctcttgcaagacagtggtttggc
gtgtatatcactccggagactccaaatgatgagtggctcttggatggacttgctggcttc
ttgacagatttttatatcaagaaacatttgggaaataatgaggcccgatatcggagatac
aaggcaaattgtgcggtttgcaaagttgataatggtggagcgacagctttgagctgttca
gcttcctgcaaggatttatatggaactcagtgtattggtttgtatggaaaaataagatcg
tggaagtctgtggctgttcttcagatgttggaaaagcaaatgggtcctgaatctttccgt
agaattttacaaacgatagtttctcgagctcaagataaaacacgttccatgaagactcta
agtactaaggagtttcgacattttgccaataaggttgggaatcttgaacgtccgtttctt
aaggatttctttccacggtgggttggttcttgtgggtgtcctgttttaaggatggggttt
tcctataacaaaaggaagaatatggttgaattagctgtgttgcgaggatgtacagcgttg
cagacttcaactacatccactcttgatattaatccagagacagaaaatagagatggagat
actggatggcctggtatgatgagcatcagggtatatgaacttgaaggtatgtatgaccat
cctattctgccaatggctggtgaagcatggcagctactggaaatacaatgccactcaaag
cttgctgctagacgctttcagaagcccaagaaagggttaaaacatgatggatctgatgat
aatggtgacgtgccttccatggatgtgcgctcaaatactgagtcccctttattatggatc
agagcagatcctgatatggagtaccttgccgaggttcactttaaccaacctgttcagatg
tggatcaatcaattagagaaggacaaagatgttattgctcaggcacaagcaattgcagcc
cttaaggcatcaccacaactatcattttcaattgtaaacgccctaaacaattttctcggt
gactccaaggccttttggagagtacggattgaagcagcatttgcattggcaaattcagca
tccgaggaaactgatttttctggtctactccatttggtgaaattttacaagagtcgaagg
tttgatcctgacattggacttccaaagccgaatgattttcatgattttgctgagtatttt
gttcttgaggctattccccatgctgttgccatggttagagctgctgacaagaaaagccca
agagaggctatcgagtttgttctacagctattgaaggttattgtttatgttagactttgt
tttattagctgtattatttctgtcaggatttgtgttttattgtttacttatttagtagat
tataattacaatatatga
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integrated database retrieval system
