Vigna umbellata (ricebean): 124841168
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Entry
124841168 CDS
T09662
Name
(RefSeq) ATP-dependent DNA helicase Q-like 4A
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03440
Homologous recombination
vum03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124841168
03460 Fanconi anemia pathway
124841168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vum03032
]
124841168
03400 DNA repair and recombination proteins [BR:
vum03400
]
124841168
Enzymes [BR:
vum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
124841168
DNA replication proteins [BR:
vum03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
124841168
DNA repair and recombination proteins [BR:
vum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
124841168
Bloom's syndrome complex (BTR)
124841168
FA (Fanconi anemia) pathway
124841168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
Cu2_monoox_C
HHH
Motif
Other DBs
NCBI-GeneID:
124841168
NCBI-ProteinID:
XP_047173343
LinkDB
All DBs
Position
Unknown
AA seq
1168 aa
AA seq
DB search
MCCLVATQMRPGETNSVRVDKENNRDWLRHANAHENFSSQEKFLSSNFLFSVPPKKPRHQ
EPNPETAGFVFQRSENIQVSQRVQFDKAWDALSSLQNSSRNYVQPGKTVNVNCQSHENTR
TAPIHGGYQNDNRMCPDVTDIPASRNTSWGLDGSLNNHNKYTGQINESSNCMSGDIDDDN
ILENIDVDQIVEKYQSTCTPKPSISKFPPVTPNADKDGFARQGDDVLPPDLCLDCIHGYK
LGLCPEAAIHLQELKDNLIAISNELLDNCETLNSTQISKLRHDRSQLNKQIQQLEKYTQS
SNLNEERQKSHFSASTAPFASYVYETPQQTGACNGSKQYDTQAYMGNGTCGSTFQSLPSF
SVDNYSTSSGPVEREEFIPKIIEVNYIEGSGDKRWSSHDFPWTKELEVNNKKVFGNHSFR
PNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALVCHGITLVISPLVSLIQDQIMHLLQ
ANIPAAYLSANMEWTEQQEILRELNSDYCKYKLLYVTPEKVVKSDNLLRHLENLHFRELL
ARIVIDEAHCVSQWGHDFRPDYQGLGILKQKFPNTPVLALTATATASVKEDVVQALGLVN
CIVFRQSFNRPNLWYSVVPKTKKCLEDIDKFIRENHFDECGIIYCLSRMDCEKVASNLQE
FGHKCAFYHGTMDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIE
GYHQECGRAGRDGQRSSCVLYYNYSDYIRVKHMISQGSIEQSPMASGYNRSNMINPGSIL
ETNTENLMRMVSYCENEVDCRRLLQLVHFGEKFNSSTCHKTCDNCLKITNFIEKDVTEIA
KQLVELVKLTGQRFSSSHILEVYRGSFSQMVKKNRHETVSLHGAGKHLAKGEASRILHHL
VVEDILVEEVKKSDYYGSVSSILKVNELKVCNLFAGHRIILRFPSSVKALKPGKSDATPA
KGSLTSGKPNVIPTNAPQPQTEVDLNLSAKLYTALRMLRTTLVKEAGDSVFAYHIFGNAT
LQQMSKRVPRTKEELLDINGIGKAKVSKYGDEILETIENTINEYYKLDKASSGSKGSADS
AKRRRESNGDPYANAEDDDALTNSTGRSKKRTIKRQNKKAVIYDSAEEDYFSGCHDEDLD
FDLIEIDALDQVTCKNASGRVLPQWTTS
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgtgttgtttggttgctactcaaatgagaccaggtgaaaccaattcagttcgcgttgat
aaagagaataacagggactggttgcggcatgccaatgctcatgagaatttctcctcccaa
gagaagtttttgagctctaattttctgttctctgttccgcccaagaagccccgccaccaa
gaaccgaaccctgagactgccgggtttgtttttcaacgaagtgaaaatattcaagtttca
cagagagtacaatttgacaaggcttgggatgctctttcaagtctacaaaattctagtagg
aactatgtacaacctggaaaaactgtcaatgttaattgtcagagtcatgagaatacgaga
acagcaccaatccatggaggctatcagaatgacaaccgtatgtgtcctgatgtcactgac
attccagctagcagaaatacttcttggggtttggatggttcattgaacaatcataataag
tacacaggccaaatcaacgagtcttctaactgcatgtctggagatattgatgatgataac
atacttgagaacattgatgttgaccaaattgttgagaaataccaatcgacctgcactcct
aagccgtcaatatccaagtttcctcctgtaacaccaaatgcagataaagatggatttgct
agacagggggatgatgttttgccaccagacctgtgtttagattgcatccatgggtacaag
ctagggctttgccctgaagcagcaattcatttgcaggaattgaaggataatctaattgca
atctctaatgaactgctcgacaattgtgaaaccctcaattctacacagatatcaaagctt
cgccatgataggtcacagctgaataagcaaattcagcaactagaaaaatatactcaatca
agtaatcttaacgaggaaaggcaaaagtcacatttttctgcatccacggcaccattcgca
tcatatgtgtatgaaacacctcagcaaactggtgcctgtaatggatccaagcaatacgat
actcaggcttatatgggtaatgggacatgtggttcaacattccagtctcttccatctttt
tctgtagacaattatagcacatcatcaggcccggtggagcgggaagagttcatcccaaag
attattgaagttaattacattgaaggttctggagacaaacgctggagcagccacgatttt
ccttggacaaaagagttagaggttaataataaaaaggtatttggaaatcattcctttcgc
cccaatcaaagagaggtcattaatgccacaatgagtggatgtgatgtttttgttctgatg
cccactggtggtggaaagagtctgacttatcagttaccggctcttgtttgtcatggtata
acattagtaatttctccccttgtgtcccttattcaggatcaaataatgcacttactgcag
gcaaatataccagctgcttacttaagtgccaatatggaatggactgaacagcaggagatc
ctccgagaacttaattctgattactgtaaatacaagttattatatgtgacacctgaaaaa
gttgtcaaaagtgataatcttttgcgacacttagagaatttacattttcgtgagctgctt
gcaaggattgtaattgatgaggctcactgtgtgagccaatgggggcatgattttagacca
gattatcagggacttggtatattgaaacagaaatttccaaatactccagttttagcttta
acagctacagcaactgctagcgtaaaagaagatgtcgtgcaagcacttggtcttgttaac
tgcattgtttttcggcaaagttttaatcgcccaaacttatggtattctgttgtccccaag
accaaaaagtgtttggaagacattgacaaattcattagagagaatcattttgatgaatgt
ggcattatctattgtctttcacgaatggattgtgaaaaggtcgctagcaatttgcaggaa
tttggacataaatgtgcattttatcatggtaccatggatcctgctcaacgtgcctttgtt
caaaaacagtggagcaaagatgaaatcaatataatttgtgctacagtagcatttggaatg
ggtattaataaacccgatgtccgctttgtaattcaccattctctcccaaaatctattgaa
ggctatcatcaggaatgtggccgagctggtagagatggtcaacgttcgtcttgtgtatta
tattataattatagtgattatatacgagtcaagcatatgataagtcaaggatcaatagag
caaagtcccatggcatctggatacaatcgttcaaatatgataaatcctggaagcatacta
gaaacaaacactgaaaaccttatgcgaatggttagttattgtgaaaatgaggtcgactgt
cggcgccttctgcagcttgttcattttggggagaagtttaattcttcaacttgtcacaaa
acgtgtgataattgcttgaagatcacaaatttcattgagaaggatgtcacagagatagca
aagcaattggttgaacttgttaagctaacgggacagaggttctcatcatctcatatatta
gaagtctatcgtggttcctttagccaaatggtcaagaaaaatcgccatgagacagtgagc
cttcatggtgctggaaagcatctagctaagggtgaggcttcccgaatattgcatcatctt
gttgttgaggatattcttgtggaagaagtaaagaaaagtgattattatggatcggtatcg
tcaatattgaaggtaaatgagctcaaggtctgtaatctgtttgctgggcacagaattata
ttgagattcccatcgtctgtaaaggcattaaaaccagggaaatctgatgcaactccagcc
aagggttctttgacatctgggaagccgaatgttattccaactaacgctcctcagcctcaa
actgaagtggatttgaatctttcagccaagttatacactgctctgcgtatgttgaggaca
actcttgttaaagaagctggagatagtgtttttgcttaccacatatttggtaatgccacg
ttgcagcagatgagcaagagagtgccgagaacgaaagaagaactccttgatatcaatggc
attggcaaggcaaaggtaagcaagtatggggatgagatactggaaaccattgagaatacc
ataaatgaatattacaaattggacaaagccagtagcggcagcaaaggtagtgcagattct
gctaaaaggagacgagagtcaaatggagatccatatgcaaatgctgaggacgatgacgcc
ctcaccaatagtacaggtcgttctaagaaaaggactataaagagacaaaataaaaaagct
gtgatatatgattctgcagaggaagattatttttctggatgccatgatgaagacctagac
tttgacctcatagaaattgatgcattagatcaggtgacttgtaaaaatgcttctgggaga
gtactacctcaatggacaacatcttga
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