Vigna umbellata (ricebean): 124841373
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Entry
124841373 CDS
T09662
Name
(RefSeq) nuclear pore complex protein NUP155 isoform X1
KO
K14312
nuclear pore complex protein Nup155
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124841373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124841373
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124841373
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
124841373
NCBI-ProteinID:
XP_047173588
LinkDB
All DBs
Position
Unknown
AA seq
1487 aa
AA seq
DB search
MMSWEDEIVMRDVTNAGLVVSDRIGREVSSQLDLEEALEASRYTSHPYSTHPREWPPSVE
VVNTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEFSG
EEQAICAVGLAKSKPGVFVEAIQYVLVLATPVELILVGVCCSGGADGSDPFAEVTLQPLP
EHTISSDGVTMTCVACTDKGRIFLAGRDGHIYEVLYSTGSGWQKRCRKICMTAGFGSVIS
RWVIPNVFNFGAVDAIVEMVFDNERQILYARTEEMKIQVYVIGPNGDGPLKKVAEEKNLV
NQRDAHYGARQSTGSRVSSRSPKPSIICISPLSTLESKWLHLVALLSDGRRMYLSTSPSS
GSLTGFNTNHHKPSCLKVVTTRPAPPWGVSGGLTFGAMALAGRPQNEDLSLKIEASYYSA
GTLILSDASSSTMPSLLVLSRDSSTQSLPSGNLGTSTRSSRALRESVSSLPVEGRMLSVA
DVLPSPDTAATVQSLYSEIEFGGYESSIESCEKLSGKLWARGDLSTQHILPRRRIVVFST
MGMMEIVFNRPLDILRRLLESNTPRSVLEDFFNRFGAGEAAAMCLMLAARVVHSENLISN
VIAEKAAEAFEDPRVVGMPQLEGSNALSNTRSAAGGFSMGQVVQEAEPVFSAAHEGLCLC
SSRLLFPLWELPVMVVKGNLGPSGTLSENGVVVCRLSVGAMQVLEQKLRSLEKFLRSRRN
QRRGLYGCVAGLGDLSGSILYGNGSTLGADDRNMVRNLFGAYSRNMESNGSRTNNKRQRL
PYSPAELAAMEVRAMECIRQLLLRSGEALFLLQLLSQHHVTRLIQGFDSGLQQTLVQLTF
HQLVCSEEGDHIATRLISALMEYYTGPDGRGTVDDISRRLRDGCPSYYKESDYKFFLAVE
ALERAATTIDAEDKENLAREAFNSLSKVPESVDLRTVCKRFEDLRFYEAVVRLPLQKAQA
LDPAGDAYNDEIDATVREQALAHREQCYEIIISALRSLKGDTLQKEFGSPMNSTVSQSAL
DPSSRKKYICQIVQLGVQSPDRIFHEYLYQAMIDLGLENELLEYGGPDLLPFLQNAGRKP
IHEVRAVTATTSPMGQSGAPMSTNQVKYYELLARYYVLKRQHMLAAHALLRLAERRSIDG
VPTLEQRCQYLSNAVLQAKNATSSDGLLGSGRSSIDSGFLDLLEGKLAVLRFQIKIKEEL
ESMASRSDVLPSTSDSAENGVIPEGSSTADANFVNATREKAEELASDVKSITQLYNEYAV
PFGLWEICLEMLYFANYSGDTDSSIVRETWARLIDQAISRGGIAEACSVLKRVGPRLYPG
DGAVLPLDIICLHLEKAGLERLNSGVEAVGDEDVARALVSACKGAAEPVLNAYDQLLSNG
AILPSPSVRLRMLRSVLVVLREWAMSAYSQRMGRSAAGHSSLILGGGFSSERAIASQGIR
DKITSAANRYMTEVRRLALPQNQTEHVYRGFKELEESFISQHSFDRF
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgtgggaagacgagattgtgatgcgcgatgtcacgaatgcggggcttgttgtc
agcgatcgcattggtcgggaagtttcctctcagctcgacctcgaagaagctctagaagct
tccagatacaccagccacccttattccactcacccccgagagtggcccccttccgttgag
gtagtgaatacctgggagttgccccctgtgctcattgaaagatacaatgcagctggtggg
gaaggaactgctttttgtggaatatttccagaaataaggagggcgtgggcgtctgtggac
aactcattgtttctttggcgttttgacaagtgggatggccaatgtcctgaatttagtggg
gaggagcaagccatttgtgcggttggtcttgcaaaatcaaagcctggtgtttttgttgaa
gctatccagtatgttttagttttggcaacacctgttgagttaattttagttggagtttgt
tgctctggaggagcagatggttcagatccgtttgcggaagttacattgcagcctttgcca
gagcatacaatatcatctgacggggttacaatgacttgtgtagcatgtactgacaaaggt
cgtatttttcttgctggtcgggatggccacatatatgaggttctttactcaactggctct
ggatggcaaaagcgctgccgaaaaatctgcatgactgctggttttggaagtgtcatttca
agatgggttataccaaatgtatttaattttggagctgttgatgctattgttgaaatggtt
tttgacaatgagagacaaatattatatgcacggactgaagagatgaagattcaagtttat
gttataggaccaaatggtgatgggccgttaaagaaagtagctgaagaaaagaatcttgtc
aatcagagggatgcacattatggagctagacaatcaactggatcaagagtctcaagtcga
tctccaaagccatctatcatatgcatctcacctttatctactcttgaatcaaagtggctg
catctggttgctcttttatcagatggtagaaggatgtacctatctacctctccttctagt
ggaagcttgactggatttaacaccaatcatcacaagcctagctgtttaaaggttgtcact
acaaggcctgctccaccttggggtgttagtggaggtttaacctttggggcaatggctctt
gctggtagaccccagaatgaggatctctccctaaaaattgaggcatcttattattctgct
ggaactcttatcctctctgatgcgtcatcttcaaccatgccatcacttcttgttttgagc
agggattcaagcacacagtcattaccatcaggtaatttaggaacaagtaccaggagttcc
cgggcattacgagagtctgtatcttctttaccagttgaaggacgaatgctttcagtggca
gatgttttaccttcaccggatactgcagctactgtgcagtctctgtattcagaaattgag
tttggtggttatgagagctctattgaatcatgtgaaaagttgtctggcaaactctgggct
aggggagatctctcaacccaacacatactgccaagaagaaggattgttgtcttcagcacc
atgggcatgatggaaattgtttttaacaggccactggacattctaaggcggctattggaa
tcgaacactccaaggtcagttttagaagatttcttcaatcgatttggtgcaggtgaggct
gctgcaatgtgtttaatgcttgctgcaagagtagtgcattctgaaaaccttataagcaat
gttattgctgagaaggcagctgaagcttttgaggatccaagggttgttggcatgccacaa
cttgaaggtagtaatgcattatcaaacacaagaagtgctgctgggggattcagcatgggc
caagttgttcaggaagctgagcctgttttttcagccgcacatgaggggctctgtttgtgt
tcatctagattactttttccactatgggagcttcctgtaatggttgtaaaaggcaattta
ggtccttcaggcaccctatctgaaaatggcgtagttgtgtgcagactctctgttggggct
atgcaagtccttgaacagaaactccgttctttggagaaattcttaagatcaagaaggaac
cagaggaggggactttatggctgtgtagcaggattgggagatctgagtggttccattctg
tatggtaatggttcgacattgggtgctgatgatcgcaatatggtcagaaatttatttggt
gcatattccagaaatatggagtccaatggtagcagaacaaataataaaaggcaaaggttg
ccttatagtcctgctgaattagctgccatggaggtgagagcaatggagtgcattaggcag
ttgctccttagatctggcgaagccctatttttgcttcaacttctgtcacagcatcatgtg
actcgattaattcagggatttgactctggccttcaacaaacattagttcaattgacattt
catcaactagtctgttctgaggagggtgaccatattgctactagacttatatctgctctt
atggagtattatactggtcctgatggcagggggactgtagatgacattagtaggagattg
cgagatggctgcccaagttactataaggagtctgattacaaattcttcttagctgtggaa
gcactggagagagctgctacgactatagatgccgaagacaaggagaatcttgcgagggaa
gcatttaattccttgagtaaagttccagaatctgttgacctacgaactgtttgcaagcgt
tttgaggatttaagattttatgaagctgtagtgcgcttacctcttcaaaaggcacaggct
cttgaccctgcaggtgatgcttataatgatgaaattgatgcaactgtcagagaacaagca
cttgctcaccgtgagcagtgttatgagataattatcagtgccttgcgatctctgaaaggt
gacaccttgcagaaggaatttggctctcccatgaattcaactgtttcacaatctgccctt
gatccatcctcaaggaagaaatatatatgtcaaattgttcaactgggtgtccaatctcca
gacagaattttccatgagtatctttaccaggctatgattgatctaggtcttgaaaatgaa
ttgctagagtatgggggtcctgacctgttgccatttttgcaaaatgctggtcgtaaacct
atacacgaggttcgtgctgtcactgcaacaacttctccaatggggcaatcaggagcacca
atgtcaactaatcaagtcaagtactatgaacttttggcacgatattatgtcttgaaacgc
caacatatgcttgcagctcatgcactgcttagactagctgaaaggcgttcaattgatgga
gttcctactcttgaacagaggtgtcaatacctaagtaatgcagttctacaggcaaaaaat
gcaactagtagtgatgggttactaggttctggtcgaagttccattgacagtgggtttcta
gatttgcttgaagggaagcttgcagttctccggttccagataaaaatcaaagaagaactg
gagtctatggcttctaggtctgatgttttacctagcacgtcagattctgctgaaaatggt
gtaatccctgagggtagttctactgctgatgccaattttgtaaatgcaacaagagagaaa
gcagaagagctagcttcagacgttaagagtattacccagttgtataatgaatatgccgtt
ccctttgggctctgggagatatgcctggagatgctctactttgccaattattctggtgat
actgacagcagcattgtcagagagacgtgggctagacttattgatcaagctatatcaaga
gggggcattgctgaagcttgctcggtactaaagagggttgggccccgcctttatcctggt
gatggagctgttttaccacttgacattatttgtcttcacctagagaaggctggactggag
aggttgaattcaggggtcgaagccgttggagatgaagatgttgcaagagcccttgtttct
gcttgtaagggtgcagctgaacccgtattgaacgcatatgaccaattgttgtcgaatgga
gctattttgccatcccctagtgttagattacgtatgttgagatcggttctagtggtgctt
cgagagtgggcaatgtctgcatattcacaaaggatgggtagaagtgctgctgggcattcc
tccctaatactaggtggaggattctcatcggaacgtgccatcgctagccaaggaattcgg
gacaagatcacgagtgcagcaaacaggtatatgactgaagtgcggaggttagcccttcca
cagaaccaaacagaacacgtttaccgaggtttcaaagaacttgaagaatcgtttataagc
caacattcatttgatagattttga
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