Vigna umbellata (ricebean): 124841581
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Entry
124841581 CDS
T09662
Name
(RefSeq) autophagy-related protein 13b
KO
K08331
autophagy-related protein 13
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
124841581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vum04131
]
124841581
03029 Mitochondrial biogenesis [BR:
vum03029
]
124841581
Membrane trafficking [BR:
vum04131
]
Autophagy
Autophagosome formation proteins
ULK complex
124841581
Atg1 complex
124841581
Mitochondrial biogenesis [BR:
vum03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
124841581
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
124841581
NCBI-ProteinID:
XP_047173832
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MASSHGNAHSDAAKMEQIITEFFAKSLHIILESRAPYVSSRNFYGDQAALSPCSSSSSSS
SVRPRDKWFNLALRECPAALENIDIWRQNNIECIVIDVILVQRPLDWDPVTASLSPRRVL
PRSSSLKERCPFGWNTDQEELGVVGRSEKIVERWVVQYESRKTRDSSSCSRRSSSVSLHN
SYKKSTLLLRSLYSTLRLLPAYKVFRELNSSGQIRDFTLAHRVSSFVEPFTRKEEAEMMK
FGFTPVDTSSGRLCLSVMYCPVVSGVSSEPSTPMSPQVITDYVGSPLADPWRRFPSVPVA
GLPSHGSPSSLPSSRQRSFSFDHYRASPPSYLPSPTYSESLSSVYNASLRRFPPASLPPH
PTEMSLIQKKNTNFDDYYHSRSPSTDNSGPLPCKPLLRSGSAPVSIPAEVANFPCYSNRH
NVPPSPPLIGSRGTAKIDRCTNAMQTGATAEKLFSLGKDESRKYSGVKISSNSSPSSRSY
QDDFDDTDFTCPFDVDDDDITDPGSRAESLDHGLLAETFEGGGFFPIRKSHDAAVGALVQ
MLKKAPPLRQDFSTSQHLSQGVTNPETWNNNIGGPSEILEASKQVSIMSSGMIATRKTTA
DALEEFQGYKEMKNLLLMRDSKHQT
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctctcatggtaatgcacactctgatgctgcaaagatggaacagataatcact
gagttttttgccaagagtcttcatataatactcgaatcaagggcaccctatgtgtcctct
cgcaatttttacggtgatcaagctgctttgtctccatgttcgtcgtcttcatcttcgtcc
agtgtgcggccgagggataagtggttcaatttggcgcttcgggagtgcccggcggcgttg
gagaacattgacatctggcgccagaacaacattgagtgcatagtgattgatgtgatttta
gtgcagagacctctggattgggaccctgtgactgcgagtctctctcccagaagggttctc
cccaggagttcttcgctgaaggaaagatgcccttttggctggaacactgatcaggaagaa
ttgggggttgtgggaaggagtgaaaagattgtggagaggtgggttgtgcagtatgaaagt
aggaagacaagggattctagttcatgcagtaggaggtcaagcagtgtttctttgcataac
tcgtataagaaatcaactttgcttttgaggtctttgtattccactcttagacttttacct
gcctataaagtattcagagagcttaattcttctggacaaattagggattttacccttgct
caccgtgtgtcttcttttgttgagcccttcacccggaaagaagaggctgaaatgatgaaa
ttcgggttcacccctgtggatacttcttctggtaggctgtgtcttagtgtgatgtattgc
cccgtggtctcaggcgtgagctcagaaccttcgactccaatgtccccacaagttataaca
gactatgttgggagtccattggctgatccgtggagaaggtttccttctgttcctgtggca
ggcttgccatctcatggctctccatcatcgttaccatcctcaaggcagcgcagttttagt
ttcgatcattatagagcctcacctccatcttatttaccttcccctacttattcagaatca
ctctcttcagtgtataatgcaagtttgcggcgtttcccccccgcaagtttgcctcctcat
ccaactgagatgtctttgattcaaaagaagaatacaaattttgacgattattatcactct
cgatcaccttcaaccgataattcaggaccattaccatgcaaaccacttttacgatctgga
agtgctcctgtcagcatacctgctgaagttgctaattttccttgttattccaataggcat
aatgtgcctccgtctcctcccctaataggttcaaggggcactgctaagattgatagatgt
acaaatgctatgcaaactggtgcaacagctgaaaagctgttttctcttggaaaagatgag
tctcgaaaatattctggagtcaagatatcgtctaacagctcgccctccagtaggtcttat
caggatgattttgatgatactgattttacttgtccatttgatgtggatgatgatgatatt
acggatccaggaagcagagctgaatctctagatcatggtcttttggctgagacatttgaa
ggtggaggattctttcccattagaaagtctcatgatgctgctgttggtgcgcttgtacaa
atgctgaagaaagcaccacctctccgtcaagatttctccacttcacagcacctgtcacaa
ggagttacaaatcctgaaacctggaacaacaacattggagggcccagtgagatcctggag
gcatcaaaacaagtgagcataatgtcttctgggatgatagccaccagaaaaaccacagct
gatgcactggaagagttccaaggttacaaagagatgaaaaacctgttgcttatgcgagat
agtaagcaccagacatag
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