Vigna umbellata (ricebean): 124841594
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Entry
124841594 CDS
T09662
Name
(RefSeq) rhamnogalacturonate lyase-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
124841594
Enzymes [BR:
vum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
124841594
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Peptidase_M27
Motif
Other DBs
NCBI-GeneID:
124841594
NCBI-ProteinID:
XP_047173846
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All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MKGKSQKVFLLFWFGMTLRLFFLLGACCEKTTRKTMRQSPPTQQTTSKSGVILNTKNSQQ
VVVDNGIVSVNFSRPKGYTLGMSYKGIDNILEDDNEEQDRGYLDVVWNMPPSKNSTFERI
FGTNFTVIANDDNFVELSFLRTWNSSMKGSSVPMNIDIRYILRSGDSGFYAYAIFDRPEG
WPAVEIDQIRIVFKLQSKFNYMAISDERQRNMPTKKDRETGQELAYPEAVLLTKPANPEF
RGEVDDKYQYSSENKDSTVHGWVSVDADAPVGFWMITPSNEFRNAGPIKQDLTSHVGPIT
LSMFVSTHYAGKESTMSFKEGETYKKVFGPVFVYVNSASGDDGTLSLWSDAVQQQAKEVR
SWPYEFPKSVDFVPPSERGIVLGRLLVKDSYYRGGKVVYADNAYVGLALPGETGSWQKES
KGYQFWTQADTKGFFLINNIVPGDYNLYAWVPGFIGDYRYNVTITIKKGGVITLDSLVFV
PPRSGPTLWEIGFPDRTAAEFYIPDPYPTLMNKLYNKRPNDKFRQYGLWDRYTDLYPNDD
LVFTVGKSKYDKDWFFAHVSRIAGNKTFQPTTWQIVFDHPNEVENGNYTLQLALACTSDA
NLQIRFNDAGAKNPDFGTGKIGADSAIARHGVHGLHRLFSIGVKSSRIVKGKNTIYLKQA
RAKNAYQGVMYDYIRLEGPPSTGK
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggaagagccaaaaggttttcttgcttttctggtttggaatgaccctacgcttg
tttttcttacttggtgcctgttgcgagaagacaacaagaaaaactatgaggcaaagcccc
cccactcaacagacaacttctaagtctggggtcattctgaatacaaagaacagtcaacag
gtggtggttgacaatggcattgtttccgtcaatttttcaagacctaagggttacaccctt
ggaatgtcatacaaaggaattgacaatatactcgaagacgataacgaagaacaagataga
gggtaccttgatgtcgtttggaatatgccaccatcaaagaatagtacttttgagagaatc
ttcgggacaaattttacggttatagcaaatgacgacaatttcgttgagctctcattttta
agaacatggaattcgtccatgaaaggctcgagtgtccctatgaacattgacataagatac
attttgcgaagtggtgattccggattttatgcatatgcaatatttgatcgtcctgaagga
tggcctgcggtggagattgaccaaattaggatcgttttcaaactccaatccaaattcaac
tatatggcaatatcggatgaaaggcaaagaaacatgccaacgaagaaagatagagaaact
ggtcaagaattggcataccccgaagcagttctgttaacgaaaccagccaatccagaattt
agaggagaggtggatgacaaataccagtactcaagtgaaaacaaggatagcactgttcat
ggatgggtgagtgttgatgccgatgcacccgtgggtttctggatgataaccccaagcaac
gagttccgcaatgctggccccatcaagcaagaccttacttcacatgttggccccattacc
ctctcgatgtttgtgagcactcactatgctggcaaggagtcaaccatgtcctttaaagaa
ggggagacttacaaaaaagttttcggccctgtgttcgtctacgttaactctgcttcaggc
gatgatggtacactatccctctggtcagacgctgtgcagcagcaagccaaagaagtcaga
agttggccgtacgaatttcctaaatcagtggatttcgttccacccagtgaaaggggaata
gttttgggaagattactagtgaaagatagttactacagaggaggtaaagttgtgtatgct
gacaatgcttacgttggtctagctttacctggagaaacagggtcatggcaaaaagaaagc
aagggctatcagttctggactcaagctgatacaaaaggttttttcctgataaataatatt
gtgcccggtgactataatttgtatgcatgggttcctggcttcattggtgattacagatat
aatgttacaatcaccatcaaaaagggaggagtcatcacattggattcacttgtgtttgtt
ccaccaagaagcggaccaaccttgtgggaaattgggttcccagatcgcacggctgcagaa
ttctatataccagacccttaccctacgctcatgaataaattatacaacaaaaggcccaat
gacaagtttaggcaatatgggttgtgggatcgttacactgatttatatccaaatgatgat
cttgttttcactgttggtaaaagcaagtatgacaaggattggtttttcgctcacgtttca
agaatcgcaggaaacaagacattccagccaacgacatggcagattgtatttgatcatcca
aatgaagtagaaaatggaaactacacattgcaactggcattggcatgtaccagtgatgct
aacctgcagattcgtttcaatgacgctggagcaaaaaacccagactttggaactgggaaa
atcggagcagatagtgcgatagcaaggcatggtgtgcatggtttgcataggctattcagc
atcggtgtaaaaagtagtcgaattgtgaaaggaaagaacacgatctatttgaagcaggca
agagccaagaatgcttatcaaggagtaatgtatgattatatccgtttagaaggacctcca
tcgacagggaaatga
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