Vigna umbellata (ricebean): 124841597
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Entry
124841597 CDS
T09662
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
124841597
Enzymes [BR:
vum01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
124841597
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Paralog
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
Motif
Other DBs
NCBI-GeneID:
124841597
NCBI-ProteinID:
XP_047173850
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MLRGTVANGRRRPLSRWLDAKQVVAPKSKASSWAFVQRRQVFRVEHAFAGIYKRSLSEFK
GSDVAFNNPEVKLHIENKQITVQNGIIRVTFSNPEGTILGISYNGIKNVLEGRNNFNNRG
YFDIVWNSPGAPSKLWGIEGSRFSVIEANKNEVELSFSRTWNKDNSSPPLNIDKRYILRR
GSSGLYIYGIFEHPEDFPATEIDHIRIVFKLQKERFHYMAIADDRQRVMPTAEDRSTGQR
LDYDEAALITNPSNPQLQGEVDDKYQYSCENKDNKVHGWINLDFKNNKSVGFWMITPSNE
FRSGGPIRQGLTSHVGPVTLNILHTTHYSGKEVTMTLHEGEPFKKVYGPVFAYLNSVSRV
HHSEQVLWSDAVQQLSKEINRWPYDFPKSEDFVPTNKRGRVEGQLLVQDRHIKGGTFLYG
ENAHIGLALPGDVGSWQRQSKGYQFWTHAAKLGHFAIANIVPGDYNLYAWIPGVFGDYKY
NTTITITPGCIIQLGSLIYNPPRTGPTLWEIGIPDRSAAEFHVPNPYPNLINRLYIAKPL
HKFRQYGLWKRYNELYPNEDLTYTVGVSDYSKDWFYAQVPRNIGNNSYHPTVWEIKFHLP
FVMRGIYTLRLALASATRSNLMVRFNNPVARPPHFSTGLIGQDNAIARHGIHGLYWPYSI
EVGSNVLVEGSNTIYLRQTKGMSPFQGIMYDYIRFERPEA
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtggcaccgttgccaatggtaggcgaaggcccctctcacgatggttagatgca
aagcaggttgttgcccccaagtccaaggcatcttcttgggcttttgtacagaggagacag
gttttccgggtggaacatgcgtttgctggaatctacaaaaggagtttaagtgagttcaaa
ggttctgacgtagcctttaataatcctgaagtcaaattgcatatagaaaacaagcagatc
acagtgcaaaatggcatcattcgtgtaactttctcaaatccggagggcactatccttgga
atttcatataatggaataaaaaatgtgcttgaaggtcgcaataacttcaacaacagaggg
tattttgacattgtctggaattcacctggagccccttcaaaactttggggaattgaaggg
agtagattttcagttatagaggccaacaagaatgaagtagaactttcgttttccagaacg
tggaacaaggacaactcaagtcctcccttaaacatagacaaaagatatattttacgaaga
ggtagttcaggattatacatatatggtatatttgagcatcctgaagattttcctgcaacg
gagattgatcacattaggattgttttcaagctgcagaaggagaggttccactacatggct
atagcagatgataggcagcgagtcatgccaacagcagaagatagatctacagggcaacgc
cttgattatgatgaagctgctctaatcaccaatcctagtaaccctcagcttcaaggagag
gttgatgacaaatatcaatactcttgtgagaacaaagacaacaaagttcatgggtggatt
aacttggacttcaagaacaataagtcagtgggcttttggatgatcacaccaagtaatgag
tttcgtagtggtggcccaattaggcaaggccttacttctcatgttggccctgtcactctt
aatatactccataccactcactactctgggaaggaagtaaccatgacattacacgaagga
gaacccttcaagaaagtatatggtcccgtttttgcttatcttaactcagtttcaagggtt
catcattcagaacaagtcctctggagtgatgccgtacaacagctatcaaaggaaatcaat
agatggccttatgatttccctaaatcagaggattttgtccctacaaataaaaggggaaga
gtggaaggacaattactcgtccaagacagacacattaaaggaggcacatttttatatggc
gaaaatgcccatattggtttggcacttcccggagacgtgggatcatggcagagacaaagc
aagggttaccaattctggactcatgctgctaaacttggccacttcgctatagcaaatatt
gtaccaggggactacaatttatatgcatggattcctggagtttttggagactataaatat
aacactaccataaccataacaccaggatgtatcatccaattgggttcactcatatacaat
cctccaagaactggaccaaccttatgggaaattggcatcccagatcgctctgctgcagag
ttccacgttccaaatccttatcctaacctcataaaccgattatacatagcaaaaccattg
cacaagtttagacaatatggattatggaagcgttacaacgagttatatccaaatgaggac
ctcacttacactgttggcgtgagtgattatagtaaagattggttttatgctcaagttccc
aggaacattggaaacaactcatatcatccaacagtatgggagattaaatttcatctccca
tttgttatgagaggcatctacacactgcgacttgctttggcctcagctacacgttctaac
ttgatggttaggttcaacaaccctgtggctcgtcctccacatttttctacgggattaata
ggtcaagataatgcaatagcaagacatggcatccatggattgtattggccttatagtatt
gaagtaggaagcaatgtattggtggaaggaagcaacaccatctatcttagacaaacaaaa
ggtatgagtccttttcaaggcattatgtatgactacatccgttttgaaagaccagaagca
tag
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