Vigna umbellata (ricebean): 124841662
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Entry
124841662 CDS
T09662
Name
(RefSeq) deoxyribodipyrimidine photo-lyase isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vum03400
]
124841662
Enzymes [BR:
vum01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
124841662
DNA repair and recombination proteins [BR:
vum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
124841662
Prokaryotic type
124841662
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
124841662
NCBI-ProteinID:
XP_047173930
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MASKLASPMTVQAGRIRTLKSGSSGEAGSGPVVYWMFRDQRVRDNWALIHAVAEANKANV
PVAVVFNLFDSFLGAKSRHLGFMLRGLRQLCHRMQNTLQIPFFLFQGEAEETVTAFLREC
GASLLVTDFSPLREIRRCKEEICKRVSDSVTVHEVDAHNVVPLWVASDKLEYSAKTIRTK
INKRLSEYLIDFPDVEDNLPTRTWVLPENHSVDWDGLIGDVLRRGAEVPEVDWCEPGEIA
ARDVLMGSENGFLTKRLKGYSVDRNNPCNPNALSGLSPYLHFGQISAQRCAFEARKRRNS
HPQAIDTFLEELIVRRELADNYCFYEPHYDSIKGAWGWARNTLTEHATDKREHIYTREQL
EKAQTSDPLWNASQLEMVHKGKMHGFMRMYWAKKILEWTRGPEEALEISLYLNDKYELDG
RDPNGYVGCMWSICGVHDQGWKERPIFGKIRYMNYAGCKRKFDVDKYIAYVNKLVRDLKK
RKAENLPSEREKVLRSCVPED
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaaattagcgtcgccgatgacggttcaggcaggtcggattcggaccctgaaa
agcggttcctctggagaagcgggttcgggtcccgtcgtgtactggatgttcagagatcaa
cgggtgagagacaactgggctctgatccacgccgttgctgaggccaacaaagccaacgtt
cccgttgccgttgttttcaatctattcgacagctttctcggcgccaaatcccgtcaccta
gggttcatgctcaggggcttgcgccaattgtgtcaccgtatgcaaaatactcttcaaatt
ccatttttcttgttccagggagaggcggaggagaccgtgacagcgtttcttagagaatgt
ggagcttcacttttggtaacggatttctcaccattgcgggaaattcgaaggtgtaaagaa
gagatttgcaagagggtaagcgattcagttacggtgcatgaagtggacgcacacaacgtt
gtgccactttgggttgcctctgataaattggagtacagtgctaagacaatcaggacaaag
ataaacaaaaggctttctgagtatctcatcgatttccctgacgttgaagataatctacca
actaggacgtgggtccttcccgagaaccattccgttgactgggatggtctcattggtgat
gtgttaaggagaggagctgaggttcctgaagttgattggtgtgagccgggggaaattgcg
gcaagggatgtgttgatgggaagtgaaaatggattcttgacaaaaaggttgaaaggttac
tctgtagatcgcaacaacccgtgcaaccccaatgcactttctggtttatctccctatttg
cattttggacagatatcggctcagcgatgtgcttttgaagcacgtaagcggcgaaattca
catcctcaagccattgatactttcttggaggagttgattgtgcggagagagcttgctgat
aactattgcttctacgagccccactatgattcaataaaaggagcatggggttgggctcgg
aacaccttaacggaacatgccactgataagcgtgaacatatttacacgagggaacaattg
gagaaggcacaaacttctgatcctctctggaatgcttctcagctggagatggttcacaag
gggaaaatgcacggatttatgcgaatgtattgggcaaagaagatacttgagtggacacga
ggacctgaagaagcccttgagatatctctgtatttaaatgacaagtatgaattagatggg
cgagatccaaatggttatgttggctgtatgtggtcgatatgcggggttcatgatcagggg
tggaaggagcggcccatttttgggaaaattcgctacatgaactatgcaggctgcaaaaga
aaatttgatgtcgataaatacattgcatatgtcaataaattagttcgtgatcttaaaaag
agaaaggctgaaaacttgccgtctgaaagggaaaaagttcttcgcagttgtgttccagaa
gattga
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