Vigna umbellata (ricebean): 124841707
Help
Entry
124841707 CDS
T09662
Name
(RefSeq) phytochrome B-2
KO
K12121
phytochrome B
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
124841707
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HisKA
HATPase_c
PAS_4
PAS_9
PAS_8
PAS_3
Motif
Other DBs
NCBI-GeneID:
124841707
NCBI-ProteinID:
XP_047173988
LinkDB
All DBs
Position
Unknown
AA seq
1131 aa
AA seq
DB search
MASASGAEKSSVPPQPQIHNSRTKPSHQNIDSMSKAIAQYTEDARLHAVFEQSGESGRSF
DYSQSVRITSESVREQQITAYLLKIQRGGFIQPFGCMIAVDEPSFRILGYSENARDMLGI
TPQSVPSIDDKLEAFALGADVRTLFTHSSALLLEKAFAAREISLTNPIWIHSRTSGKPFY
GILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDVKLLCDTVVE
SVRELTRYDRVMVYKFHEDEQGEVVAESKRPDLEPYIGLHYPATDIPQASRFLFKQNRVR
MIVDCHASPVRVVQDEALVQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIINGNDE
EAVGGRSPMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVL
RTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYCQGNYYPLGVTPTEAQIRDIIEW
LLAFHGDSTGLSTDSLADAGYPGAALLGDAVCGMAVAYITEKDFLFWFRSHTGKEIKWGG
AKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDTEHSN
SKAVVDPRVAELELQGVDELSSVAREMVRLIETATAPIFAVDIDGHINGWNAKVSELTGL
AVEEAMGKSLVHDLVFKESEETVDKLLSRALKGEEDKNVEIKMKTFRPEHQNKAVFVVVN
ACSSKDYTNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIMHSPNPLIPPIFASDDNAC
CLEWNTAMEKLTGWGRGDVIGKMLVGEVFGSCCPLKGSDSITKFMIVLHNALGGQDTDKF
PFSFLDRHGKYIQTFLTANKRVNMDGQIIGAFCFLQIVSPELQQALKAQRQQEKTSFARM
KELAYISQGVKNPLSGIRFTNSLLEATSLTDEQKQFLETSAACEKQMLKIIRDIDLESIE
DGSLELEKGEFLLGNVMNAVVSQVMLLLRERTLQLICDIPEEIKTLAVYGDQLRIQQVLA
DFLLNIVRYAPSPDGWVEIHVHPRIKQISDGLTLLHAEFRMVCPGEGLPPELIQDMFNNS
RWVSQEGLGLSMSRKILKVMNGEVQYIREAERCYFFILLELPVTRKNSKKG
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagcaagcggagcagagaaatcgtcggttccgccgcagccacaaattcacaat
tcgcgaacgaagccgagccaccagaacatcgactccatgagcaaagccatcgcccagtac
acggaggacgcgaggctgcacgcggtgttcgagcagtccggcgagtctgggaggtcattc
gattactcccaatcggttcgcatcacgtcggaatcggttcgggagcagcagataacggcg
tatctcctcaaaatccagcgcggcggcttcatccagccgttcggctgcatgatcgcggtc
gacgagccctccttccgaatcctgggatactcagagaacgcgcgcgacatgctcggcatt
acgccgcagtccgttccctctatcgacgacaagctcgaggcctttgcgctaggcgcggac
gtccgcacgctattcactcactccagtgcccttcttctcgagaaggccttcgccgcgcgt
gaaattagcctcacgaaccctatctggatccattcccgaacctccggtaagcctttttat
ggcatccttcaccggattgacgtcggaatcgtcatcgatttggagcccgcgcgcacggag
gacccagcgctttctatcgccggtgccgttcagtcgcagaagctcgccgtgcgcgcgatt
tcgcagttgcagtctctccccggcggtgatgttaagcttctgtgtgacactgttgttgag
agtgttagggaattgacaaggtacgatagggttatggtttataagtttcacgaggatgag
caaggggaggttgttgccgagagtaagaggcctgatttggagccttacattggtttgcat
tatcctgccactgatattcctcaggcttctaggtttttgtttaagcagaatagggttagg
atgattgtggattgtcatgcttctcctgtgagggtggtgcaggatgaggctcttgtgcag
cctctctgtttggttgggtcaacgctcagggccccccatggttgtcatgcgcagtacatg
gctaacatggggtctattgcgtctttggtcatggctgttattattaatggaaatgacgag
gaagctgttggtggccggagtccgatgaggctctgggggcttgttgtttgccatcacact
tctgctaggtgtattccttttcccttgaggtatgcttgtgagtttctcatgcaggccttt
gggctgcagttaaacatggagcttcagttggccgcacaatcgttggagaaacgggttttg
aggacgcagactctgttgtgcgatatgcttcttagggactcgcctactggcattgttact
cagagtcctagcattatggacttggtgaagtgtgatggggctgctctttactgccaaggg
aattattatccgttaggtgtgactccgactgaggctcagataagggatatcattgagtgg
ttattggccttccatggagattcgactggtttaagtaccgatagtcttgctgatgctggg
tatcctggtgctgccttgctcggggatgcggtttgcgggatggcagttgcttatatcacc
gagaaggattttcttttctggttcaggtcgcacacgggaaaagagatcaagtggggtggt
gcaaagcatcatcccgaggacaaggatgatgggcagagaatgcatccccgttcttctttc
aaggcatttttagaagtggtgaaaagccgtagcttgccatgggagaatgcggaaatggat
gcaattcactcgttgcaacttattctacgtgactcgtttagagatactgagcatagcaat
tctaaggctgttgtggatccccgtgtggcagaactagagttgcaaggggttgatgaacta
agttctgtggcgagagagatggttagattgatagaaacagccaccgctcctatatttgcg
gttgatattgatggccacataaatggttggaatgcaaaggtttcagaattgacaggactt
gctgttgaggaggctatggggaagtccttggttcatgatcttgtgtttaaggagtctgaa
gaaactgtggacaagcttctttctcgtgctttaaaaggtgaagaagataagaatgttgag
ataaaaatgaagacgtttcgccctgaacatcaaaataaggcagtttttgttgtggtgaat
gcttgctccagcaaggattatacaaataatatagttggagtgtgctttgttggtcaggat
gttactggtcaaaaaattgtgatggacaaattcatcaacatacaaggtgactacaaggct
attatgcacagtccaaatcccttgatccctcccatttttgcatcggacgataatgcatgt
tgcctagagtggaacactgccatggaaaaacttacaggttggggacgtggggatgtcatt
gggaaaatgttagtgggagaggtttttggtagttgctgtccgttgaagggttcagattca
attacaaagtttatgattgtcttacacaatgcacttggtggacaagatacagacaaattc
cctttctcatttcttgatcggcatggaaagtatatacaaactttcctgactgccaataag
agagttaacatggatggtcagatcattggggctttttgctttttgcaaattgtgagtcct
gaacttcaacaggctctgaaggcacagagacaacaagagaaaacttcctttgctaggatg
aaagagttagcttatattagtcaaggagtgaagaatcctttaagtggcatacgctttacg
aattctcttttagaggctacaagcttgaccgatgagcaaaagcagtttcttgagaccagt
gctgcctgtgagaagcaaatgttaaagataatacgcgacattgatcttgaaagcatcgag
gatgggtccctggagcttgaaaagggggaattcttgcttgggaatgtcatgaatgcagtt
gttagccaagtaatgttactgttaagagaaagaactttacagttgatttgtgatattcca
gaagaaatcaagacattggctgtttatggtgatcaattgaggattcaacaagttttggct
gatttcttattgaatatagtgcgctatgcaccatctccagatggttgggtagagattcat
gtacatccaagaataaaacaaatatcggatgggctcactcttctccatgctgaatttaga
atggtatgtcctggtgaaggtcttcctcctgaactgattcaggacatgttcaataacagt
cggtgggtgagtcaagaaggtttagggttgagcatgagcaggaagattctaaaggtaatg
aacggagaagtccagtatatcagggaagcagaacggtgctacttttttattcttcttgaa
ctccctgtgacgcggaaaaactctaaaaagggttaa
DBGET
integrated database retrieval system