KEGG   Vigna umbellata (ricebean): 124841771
Entry
124841771         CDS       T09662                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
vum  Vigna umbellata (ricebean)
Pathway
vum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124841771
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vum03019]
    124841771
   03041 Spliceosome [BR:vum03041]
    124841771
Messenger RNA biogenesis [BR:vum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     124841771
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     124841771
Spliceosome [BR:vum03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    124841771
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 124841771
NCBI-ProteinID: XP_047174057
LinkDB
Position
Unknown
AA seq 434 aa
MDPTKKRKLDENGFGDSDPLKLSSTEARKLIERFTPEQLLDILQDAVARHADVLASVRAV
ADPDVSQRKLFVRGLGWDTTTDGLRSLFSTYGELEEAVVIVDKVTGKSKGYGFVTFRHVD
GALLALREPSKRIDGRVTVTQLAAAGNSASNANAADVGLRKIYVANVPPDLPADKLLAHF
SVYGEIEEGPLGFDKQTGKSKGFALFVYKTPEGAQAALLDPVKTVEGRQLSCKLAITDGK
QGKRAGPDSGQAHGNVQHGHGDGVGAGMGMPPAAGSGPGQYGGPQYGGPVGLGSYGGFGG
QPPLGNHNHPLNSSNPVPGSMAGAGGYGAGMGGPYGGYGGPGSAGFGAAGGLGGAGGGAG
VGGGLGGASGGAGSLYRLPGSGGMPAGGGGYPEGGHYGLSGSAGYQNQHHPPSGASPVPR
VPPGSMYPSVPPYY
NT seq 1305 nt   +upstreamnt  +downstreamnt
atggatccgactaagaagcgcaagcttgatgagaatggtttcggtgattccgacccgctt
aaactctcttccaccgaggcgcgcaaactcatcgagcgcttcaccccggagcagcttctc
gacatccttcaggacgcggtggctcgccacgctgacgtgcttgcctccgtgcgtgctgtc
gcggaccccgatgtgtcgcagcggaaactattcgtgcgcggccttgggtgggacaccacc
acagacggcctccgctcactcttctccacctacggtgagcttgaggaggctgttgtgatc
gttgacaaggtaaccggaaagtccaagggctacggctttgtcaccttccgccacgtggac
ggtgctctcctcgccctccgcgaaccaagcaagcgcattgacgggcgcgtgaccgtcacg
cagctcgctgcagcggggaactccgcttcgaatgccaacgcagccgatgttgggctcagg
aagatctacgttgccaacgtgccgcctgaccttccagcggacaagctccttgcgcatttt
tctgtgtatggtgagatcgaagagggacccttagggtttgataaacaaactggaaaatca
aaggggtttgcgctttttgtttataagactcctgaaggggctcaagctgcgttattagat
cctgtcaagactgtggaaggaaggcaattgagttgtaaactggcgataacggatggtaag
caagggaagcgagccggaccagattcgggtcaggcccatgggaatgttcagcacggtcat
ggggatggagtcggggctggaatggggatgcctcctgcagcggggtctgggccggggcag
tatggcggcccgcaatatgggggaccggttgggttgggttcgtatggtgggtttggtgga
caacctccgttaggtaaccataatcatcctctgaattcatccaatcccgtacccggttct
atggcgggtgctggtggttatggtgctgggatgggtgggccttatggtggatacggtggg
ccgggctctgcgggatttggtgctgcgggtgggttaggaggggctggtggaggtgctggt
gttggtggtgggcttggaggagcaagtggtggtgctggttctttgtatagattgcctggt
tctggtggcatgcctgcaggtggtggagggtatccggagggtggtcattatggtttatca
ggttcggctggataccagaaccagcatcatcctccttctggtgcttctccagtgcctaga
gttccacctggttcgatgtaccccagtgtgcctccttactactaa

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