Vigna umbellata (ricebean): 124842211
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Entry
124842211 CDS
T09662
Name
(RefSeq) U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
124842211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vum04121
]
124842211
Enzymes [BR:
vum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124842211
Ubiquitin system [BR:
vum04121
]
Ubiquitin ligases (E3)
U-box type E3
124842211
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
MLKL_N
Neurochondrin
zf-RING_UBOX
Arm_2
zf-C3HC4_4
zf-Nse
zf-C3HC4_2
KAP
zf-C3HC4
HEAT_EF3_GNC1
Motif
Other DBs
NCBI-GeneID:
124842211
NCBI-ProteinID:
XP_047174604
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MEGENASKVIELVNEIASISDYRPPVKKQYCNLARRLKLLIPMFEEIRDMKDQIPEDTSK
AVLAFKEALESARELLRFGSEGSKLFLVLERDGIMNKFHDVTARLEQSLGGISYDKLDIS
DEVKEQVELVLAQFRRAKGRVDEPDVRLYEDMLFLYDNSSDAATDPSVLSRLAEKLQLMG
IADLTQESLALHEMVISSGGDPGARIEKISMLLKKIKDYVQTENLVKDDNLGGKGIFAKV
YGVSTNEKSHQAPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLQAGHGTCPKTQ
QTLTSTVLTPNYVLRSLIAQWCEANGIEPPKRPSSSSQPGKSASAYSPAERSKIDGLLQK
LTSGSPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSVPDSRTQEHAVTALLN
LSIYENNKGSIVSSGAVPGIVHVLKKGSMEARENAAATLFSLSVIDENKVTIGSSGAIPP
LVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVIPTLMRLLTEPSGGMVDEALAI
LAILASHPDGKATIRASEAVPVLVGFIGNGSPRNKENAAAVLVHLCSGDQQYLVQAQELG
VMGPLLELAQNGTDRGKRKALQLLERMGRLLEQQQEVPTQTETQAQNEETQPPLITNPDD
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggagggggaaaacgcgagcaaggtgattgagttggtgaacgagatagcgagtatctcc
gattacaggcctccggtgaagaagcagtactgcaatttggcgcggaggttgaagctgttg
atcccgatgttcgaggagattagggacatgaaagaccagatccccgaggacacttccaaa
gccgtcctcgccttcaaggaagctctcgaatccgccagggaacttctcagatttggaagc
gaaggcagcaagcttttcttggtccttgagcgggatggcattatgaataaattccacgac
gtgacagctcggctggaacaatcgttgggtggtatttcgtatgataaacttgatatctca
gatgaagttaaagagcaggttgagctggttcttgcccagttcagaagagctaaagggagg
gttgacgaaccagatgttaggttgtatgaggatatgttgttcctctacgacaacagcagt
gatgcagctacagatccatctgttctaagtcgactggctgaaaaattgcaactgatggga
atagctgatcttacgcaagaatcgctagctttgcatgagatggtgatatcaagtggtggg
gatcctggggcacgcatcgagaaaatatcaatgttactgaagaagataaaggattacgtg
caaacagaaaatctagttaaggatgataatttaggaggaaaaggcatttttgcaaaagtc
tatggagtcagtacaaatgaaaagagtcatcaggcccctgttattcctgatgattttcga
tgtcccatttccctggaattaatgaaggatcctgtgattgtttcaaccggacagacttac
gagcgttcttgtattgagaaatggttgcaagcagggcatgggacatgccccaagacacag
cagactctcactagcaccgttctcacacccaactatgtcctacgaagtctcatagcacag
tggtgtgaagccaatggcatagagccaccaaaacgacccagcagcagttcacaacctggt
aaatcagcatcagcctactcaccagctgagcgaagtaagatcgacggtcttctccaaaag
ctcacatctggcagtcctgaagaccagagatcagctgctggtgagatccgccttcttgca
aagcgtaatgcagataaccgtgttgccattgctgaagctggtgcaatacctctcctcgtt
ggtcttttgtctgtgcctgactcccgcactcaagaacatgctgtgacagcgcttctgaat
ctttccatatatgaaaataacaaaggaagcattgtctcttcaggggcagttccaggtata
gttcacgtgctgaagaagggaagcatggaagcgcgggaaaatgctgcagcaacacttttc
agcctttcagttatagatgaaaacaaggttacaattggatcttcaggagccatacctcca
ctagtgacactgctgagtgagggtacccagaggggtaagaaagatgctgcgacagcactc
ttcaatttgtgcatttaccagggcaacaaggggaaggcagtgcgggctggcgttattccc
acactgatgcgactgctgactgaacctagtgggggaatggtagatgaagcattagctatt
ttggcgatactggctagccatcctgatgggaaggctacgattagagcttcagaggcagtg
ccagttttagtagggttcattgggaatggttccccaaggaacaaagagaatgcagctgct
gttttagttcatctctgttctggagatcaacaatatctggtacaggcccaagaactgggg
gtgatgggtccactgttggagttggctcaaaatggtacagacagaggcaaaagaaaggct
ttacagttactagagcgtatgggaaggttgctggagcaacagcaggaagttccaacacaa
actgaaactcaagcccagaacgaggaaactcaacctcctttgattactaaccccgatgat
tcctaa
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