Vigna umbellata (ricebean): 124842290
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Entry
124842290 CDS
T09662
Name
(RefSeq) WD repeat-containing protein 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124842290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vum03009
]
124842290
Ribosome biogenesis [BR:
vum03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124842290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Utp12
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_ACSF4
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
Beta-prop_HPS5
EIF3I
WD40_Gbeta
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_WDR41
PQQ_2
Motif
Other DBs
NCBI-GeneID:
124842290
NCBI-ProteinID:
XP_047174705
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MASTDVRGILTAFNPSLDFFAITAGDGRVKIWDTLSGQVQTEFADIASTHSTTTPQNKSI
NGHLALDYTCIKWFSFERKRKRKHASSLLVLGTGSGDVLALDVDAGHLSWRITDCHPGGV
RAIASSANVSSIYTAGADGMVCAIDFMTGNLLEKFKASTKAVSCMCVSPDGKTLATAAAQ
LKIFNCSNHKKIQKFSGHPGSVRCMVFTEDGKYILSSAVGERYVAVWRIDGPKKQSASCV
LAMEHPAVFLDSRCIDIVGDDMPGICVLAISEVGICYLWFGNSIEELRNAKATKISLSLE
DMPSRNYRGTLPAIYAAKLQGIQKPASGQVFLVYGLLVKPSFRKVLVHSGTDVKLNVSRD
GVLLPTSQALVKSKKGTNAQTVTALDRANAEDALLPIPKIFNSQENEKEKAFQKPLDKDI
IDDLWRNDESVEMEDDMAHSEADELCMEDLLKSLGMLSGESEYASNIELCSKLLKGIDVD
ATVPVKKIRATVLSMEPSKAFMLLEALLAAWESRSSSGKYILPWIYSILVNHAQNVIAEE
SDTRTLDTLDKISNFRGAALQPLLQLSGRLQLVTSQIDKASQTISHSVHELQTEESEDED
EDETKDEYYHEGDDTSEISTDDES
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaacggacgtcagaggaattttgacagctttcaatccttctctggacttcttc
gctataactgccggagacggtcgcgtcaagatatgggacacgctgagtggccaggtccag
accgagttcgcagatattgcatcaactcattcaacaactacgccacagaacaaatccatt
aacggccatcttgcactagattatacctgcatcaagtggttctccttcgaaagaaagagg
aaacggaagcatgcatcctcgttgttagtacttggaactggtagtggtgatgttctagca
cttgatgttgatgctggtcatttaagttggagaattactgactgtcatcccggaggtgtg
agagccattgcatcttcagcaaacgtgtcaagcatttatacagctggtgcagatgggatg
gtatgtgcgatagattttatgacaggaaacctgttggagaaatttaaggcttctaccaag
gcggtgtcctgcatgtgtgtttctccagatgggaagacattagctactgcagctgcacaa
ttgaagatttttaactgctctaatcacaaaaagattcaaaagttctctggtcatcctggt
tctgttcgatgcatggttttcactgaagatggcaagtatatcctctcgtccgcagttggt
gaaagatatgttgctgtttggaggatagatggtcctaaaaagcagtcagctagttgtgtt
cttgcgatggagcatccggctgtctttcttgatagcaggtgcattgatattgtgggggat
gacatgcctggcatatgtgttttggccatttcagaagttggcatttgttatttatggttt
ggtaatagtattgaagaactgcgtaatgcaaaagccacaaaaatatcattatctttagaa
gacatgccctccagaaattacagaggaactctgccagcaatatatgcggcaaaattacaa
ggcatccagaagccagcctctgggcaagtttttcttgtttatgggttgcttgtaaagcca
tcattcagaaaagttcttgtgcattctggtacagacgtaaagttgaatgtctctcgcgat
ggtgttcttctaccaacaagtcaagctctcgtcaaatctaagaagggaacaaatgcacaa
acagttactgcactagaccgagctaatgctgaggatgccttgcttccaattcctaagatt
tttaattcccaagagaacgagaaagagaaagcatttcaaaaacctttggacaaggatata
attgatgatttgtggagaaatgatgagtctgttgaaatggaagatgatatggcccatagt
gaggctgatgaactttgcatggaggacctgctaaaatcactagggatgctttccggtgaa
agtgaatatgcatcaaacattgaactttgctctaagttgttgaagggtattgatgtcgat
gctactgttccagtgaaaaagataagagcaactgttttgtctatggagccaagcaaagca
ttcatgctactggaagcgttactggctgcatgggaatcaaggtcatctagtggaaagtac
attcttccatggatatacagcatattagtgaatcatgctcaaaatgtcattgctgaggaa
tctgatacacgtacgcttgataccttagacaagattagcaattttagaggggcagctctt
cagcctttgttacaattatcaggtcgtctccaactggtgacatcacagattgacaaagcc
tcccagacgataagccattcggtgcatgaactccaaacagaagaaagtgaagatgaagat
gaagatgaaactaaggatgaatattatcacgagggagatgatacttctgaaataagtact
gatgatgaaagctag
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