Vigna umbellata (ricebean): 124842402
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Entry
124842402 CDS
T09662
Name
(RefSeq) uncharacterized WD repeat-containing protein C17D11.16-like isoform X1
KO
K14791
periodic tryptophan protein 1
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vum03009
]
124842402
Ribosome biogenesis [BR:
vum03009
]
Eukaryotic type
90S particles
Other 90S particles
124842402
Pre-60S particles
Other pre-60S particles
124842402
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_EIPR1
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
WD_LRWD1
MIOS_WD40
NBCH_WD40
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
124842402
NCBI-ProteinID:
XP_047174830
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MISAISWVPKGVSKSEPIVADPPPEEEIQELIANHKNASSDDSDNDDANDEVVAQALTVA
NAVGKASTGNTDDITIALKDLNMDNYDDEEEGVELFSSGIGDLYYPSNDMDPYIKDKNDD
DSDDLEDMVINPTDSIIVFACNEDDVSHIEVCVLEDAHSNERNLYSHHNILIPAFPLCTA
WLDCPLKGGERGNFIAVGSMEPSIEIWDLDVIDAVQPCVVLGGLEEKKKKGKKKSIKYKK
DSHTDSVLGLAWNKEYRNILASASADMNVKIWDLVTGKCEHTLDHHKNKVQAVAWNHHAP
QVLLSGSFDRTVALRDARMPKHSGYSWSVSAEVESLAWDPHTEHYFVVSLDDGIVKGFDI
RKAKPDSSPDESPTFSLHAHDKPVSSVSYNPSAPNLLATGSMDKTVKLWDLSNNQPSFVA
SNSPKAGAIFKISFSEDDPFLLAIGGSKGKLQLWDTLSDSGVARRYGSYKNRSPSGS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgatttctgcgatttcgtgggtgccgaaaggggtttcgaagtcggagcctatcgtcgcc
gatcctcctccggaagaggaaattcaagaactcatcgccaaccacaaaaacgcaagtagt
gatgacagtgacaacgatgacgccaacgatgaagtagtggcgcaagcattaacagtggcg
aatgcagttggcaaagcatccaccggaaacactgacgatataacgattgctttaaaggac
cttaacatggacaattacgatgacgaagaagaaggagttgagttattcagttccggaatt
ggtgatctttattatccgagtaacgacatggatccttatatcaaagataaaaacgatgat
gattccgatgatcttgaagacatggttattaatccgactgattctatcattgtttttgca
tgtaatgaagatgatgtgagtcatattgaggtttgtgtactcgaggatgcacattccaat
gaaaggaacttgtattctcaccataacatccttattcctgcgtttccactctgcacagct
tggctcgattgccctcttaaaggaggagaaagagggaacttcatagctgtgggttcaatg
gaaccctccatagaaatttgggaccttgacgttattgatgcggtgcagccatgtgtggtt
ttgggtggactcgaagagaaaaagaaaaagggaaaaaagaaatcaatcaaatacaaaaag
gacagtcacactgactcggtactgggtcttgcttggaacaaggagtacaggaatatacta
gcaagtgccagtgctgacatgaacgtaaagatttgggatttggttactgggaagtgtgaa
cacacactggatcatcacaagaacaaggttcaagcagttgcttggaatcatcatgcaccg
caggttcttcttagtggttcgtttgatcgtactgtagccttgagggatgcaaggatgcca
aaacattctggctattcgtggtcagtctcagctgaagtagagagcttggcatgggatccg
cacaccgaacactattttgtggtgagtcttgacgatggtattgtcaagggttttgatatt
cggaaagccaaacctgattcctcgcctgacgagagtccaactttttcacttcatgcacat
gacaaacctgtttcctcagtatcctataatccatcagcacctaatcttctcgctactgga
tccatggacaaaacggtaaaactttgggatttgtcgaacaaccaaccttccttcgtagca
tctaattctccgaaagctggggctatctttaaaatttctttctcagaggacgatcccttc
ttgttggctatcggaggctcaaagggtaaattgcaactatgggacaccttatctgattct
ggcgtcgctcgaagatatggcagctacaagaatagatcgccatctgggtcttga
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