Vigna umbellata (ricebean): 124842403
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Entry
124842403 CDS
T09662
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124842403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vum03019
]
124842403
03036 Chromosome and associated proteins [BR:
vum03036
]
124842403
Messenger RNA biogenesis [BR:
vum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124842403
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124842403
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
124842403
NCBI-ProteinID:
XP_047174832
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
MECDVGGVSDSFVLHTCKRRRVCKACIAPSVDIMTETEAFLPVLKSSGYYTKPSLKELLA
RELVEPGYCGRVSDFTVGRFGYGYVRYLNETDVRGLHINEIVNFRRHEIVVYSDENDKPA
VGQGLNKAAEVVLVLDSEILKSMEGKEDVLVNKLKQITERQEAQFISFDLVTGKWKFLVE
HFSRFGFGDDDEEDIVMDDAEVYDVEKESPSNTNEVELSHSLPSHLRLDPVKMREMRLLM
FPGDEEVEDLSHKSSSDKQYVRPLQSSAHVINHRFTPPVTRKTPFPLLEYKHGNFDSNSP
GGILMVQQHKGVPLRTVKSQGFNLDLKHETPVSGNYAHNIVDAGLFMGKSFRVGWGPNGI
LVHSGAPVGSSGDHRLLSSVINLEKVAFDNVVRDENKKVSEELLEHALVSPLKFHKGINH
VMKEVEIGPCRLKLQKLEANRTVLSEISHQYCDLIERQLSVPGLSSSTRLGLTHQVMTWE
LIRVLFSDREEKGQVESLGADNEEDMMQDMKEISQDVDREALPLIRRAEFSYWLRESVSY
HVQNQISSLNDSDYLQHIFVLLTGRQLDEAVQLAVSKGDVRLACLLSQAGGSTVNRSDIA
RQLDIWRNKGLDFSFIEEERLRLYELLAGNIHDALHDIKIDWRRFLGLLMWYKLPPNTSL
PIAFQTYKHFLDEGTAPYPVPLFIDEGTLEEVISWNSDKHFDISFYLMLLHASEETKFSF
LKAMFSAFSSSPDPLDYHMIWHQRAVLEAVGVINSNDLHILDMSFVSQLLCLGKCHWAIY
VILHLPLREDYPYLHVNLIREILFQYCETWSSDESQQQFIEDLGIPTDWMHEALATYYNY
NQDHSKALEQFLQCAYWQKAHTIFITSVAHRLFLQSKHAEIWSIATSMEDHKSEIENWEL
GAGIYISFYLMRNTLQGDPNSMTELDSLENKNATCQDFVSQLNESLAVWGGRLPVDARVV
YSRMASEI
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggaatgtgacgttggaggcgtatctgattcattcgtgctgcatacttgtaagagaaga
agggtttgtaaagcctgcattgctccgtccgttgatatcatgacagaaactgaagctttt
ttgcctgtactgaaatcaagcggttattataccaaaccatctctgaaggaattactggcc
agggagcttgttgaacctggttattgcggccgtgtttctgatttcactgttgggagattt
ggttatggatatgtcaggtatcttaacgaaactgatgtgagggggttacatataaatgaa
atcgtcaactttcgcaggcatgagatagttgtatacagtgatgaaaatgataagcctgca
gttggtcagggccttaacaaggcagctgaagtagttttggtattggacagtgaaatattg
aagtctatggagggcaaggaagatgtgctagtgaacaaattaaaacaaattacagagaga
caggaagcgcaatttatttcctttgatctagtaactggtaagtggaaattcttagttgaa
cacttcagcagatttgggtttggagatgatgatgaggaagacatcgtcatggatgatgct
gaggtatatgatgttgagaaagaatcgccatcaaataccaatgaagttgagctttctcat
tcacttccttctcatcttaggcttgatcctgttaagatgagagaaatgagattattgatg
tttccaggtgacgaagaggtagaagacttaagtcataaatcatcttctgacaagcagtat
gtacggcctttacaaagttctgctcacgtaattaaccatcgtttcaccccaccagttaca
agaaaaactccatttccattacttgagtataaacatggtaattttgattcaaactctcct
ggaggcattttgatggttcagcagcataagggcgtgcctcttaggacagttaaatcacaa
ggttttaatcttgatctcaaacatgaaactccagtatctggaaactatgctcacaatata
gttgatgcgggtctatttatgggtaaatcatttcgagttggttggggaccaaatggcatt
cttgtacactctggtgcacctgtaggaagcagtggtgatcacaggctgttatcatctgtc
atcaatttggagaaagttgcttttgataatgtggtcagggatgaaaataaaaaagtgagt
gaggaacttcttgaacatgctttggtatctccattaaagtttcacaaaggaataaaccac
gtgatgaaagaagttgaaattggtccctgcaggttgaaacttcaaaagcttgaagctaat
cgtacggtcctgtctgagatttctcatcagtactgtgatcttattgagaggcaactgagt
gttcctgggttatcttcctctactcgtttgggtctgacgcaccaagtaatgacctgggaa
ttaattagagttcttttttctgatagagaagaaaagggtcaagtagaatctttgggtgct
gacaatgaggaagatatgatgcaggatatgaaggaaatttcacaagatgttgaccgagaa
gcactccctttaataaggagggcagagtttagttattggttacgagagagtgtttcctat
catgttcaaaatcaaataagctctctaaatgattctgattatctgcaacatatttttgtt
ctattgactgggaggcaactggatgaggcagtacaactggctgtgtccaaaggagatgtg
agattggcttgtttattaagtcaggctggtggttctactgtgaatcgctctgatatagca
agacaacttgatatttggagaaataaagggctggattttagctttattgaagaggaaaga
ttgagactctatgaattgcttgcaggaaatattcatgatgcattgcatgatatcaaaatt
gactggaggaggttcttaggtttattaatgtggtacaaattaccaccaaacacttcatta
cccattgcttttcagacttacaaacattttcttgatgagggaacggctccgtatcctgtt
cccctttttattgatgaaggaacattagaagaggttatcagttggaactcagataagcac
tttgacatttcattttatctaatgcttcttcatgctagtgaagagacaaaattcagcttt
ttgaaggctatgtttagtgcattctcttcctccccagatccacttgattatcacatgatt
tggcatcaacgtgcagtattggaagctgtgggtgttatcaattctaacgatcttcatatt
ctagacatgtcatttgtgtctcagctattgtgcttagggaaatgtcattgggccatatat
gtgatccttcacttgccccttcgtgaagattatccgtatcttcatgtaaatttgattcgg
gaaatattgttccaatactgtgaaacttggagttcagacgaatctcagcaacagttcatt
gaggatttgggcattcccacggactggatgcacgaggctttggcaacttattataattac
aatcaggatcactcgaaagcccttgagcaatttcttcagtgtgcatattggcagaaagct
catactatttttataacatcggtcgctcatagattgttcttgcaatcaaaacatgctgag
atatggagtattgcaacttccatggaggaccataaatcagaaattgaaaactgggagttg
ggagctggaatttacatttcattttatttgatgagaaacacgcttcagggtgatcccaat
tccatgaccgaattggattctcttgaaaataaaaatgctacttgtcaggattttgtgagt
cagctaaatgaatccctggcggtttggggtggcagactacctgttgacgcaagggtggtg
tattcaagaatggcaagcgagatatga
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integrated database retrieval system
