Vigna umbellata (ricebean): 124842422
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Entry
124842422 CDS
T09662
Name
(RefSeq) BRCT domain-containing protein At4g02110
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124842422
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vum03032
]
124842422
03400 DNA repair and recombination proteins [BR:
vum03400
]
124842422
DNA replication proteins [BR:
vum03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
124842422
DNA repair and recombination proteins [BR:
vum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
124842422
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
124842422
NCBI-ProteinID:
XP_047174854
LinkDB
All DBs
Position
Unknown
AA seq
1308 aa
AA seq
DB search
MMEANYVSRVFRGVRFVLRGFNPAAESQIRFKLEDGGGLEAGQYGGSCTHVIVDKIAYDD
PLCVAARKDRKTLVTALWVDHSADIGMPIDASSVMYRPPKDLDGIPGAKDLIMCLTGYLR
QDRDDIMTMVGLMGAKFSKPLVANKVTHLICYKFEGEKYLLAKRLGTIKLVNHRWLEDCL
KEWVLLPEDKYSKSGYELEMTEEEAKDSEEEGEDSKLGQSGGRNIQQSSLGSKFGHAGTH
GLLKSVKEASSNLPDSTGPRVLPNFNNGEDSLTIPGNKRKSDQASSFYNVDDSRIRYQTP
DVSKLPDKYTNTTESKNADFPKALGCQDPGNTANTKSSVQQSGLHGNTTESKKLVSELTS
TSASAAGVAHSNEKLRITSYSIENQSEFSVPRILDGSSGIEGNKCENSKIDEAIGFMKST
SFEISGRGNDFTKEDEPISLLSQKRINEPSFTKLKSRKVSSDAKVSTQSANGKPQGLKVT
SQVDEPPKAGPNTNSLAFDEHFSRNPSPESAQWDSVYQNSPQTAIRSLSESKISGKPDVT
SSGMREVGGNEIGLHITKSLDSSSKGNKISHNVESGGCTNLDLSNEECNKLVRKSPTKKS
VVKGISGSKPRVGATATHKRSLSLNKTNLGEGVALCSESEEICDAKMHQGCHQNRDINKT
MEQDAVCKNANDASDRAEFLTDETEAPDDKYEFEFGMALNKESVHASEKPNRATKEKSEA
ICRATKCEEANPPKRGTNKAEIQKTSSLLVKTQARECAAGKANATVNKYVGDAGDRTETL
DDETEDPDDKLKNVLGVAPEEELVYPSKKRDKSTKVHPSRKQDKSTEEKPEAICPAPKCD
EAMPPQGVTNKTEKQKPSSLVVRKRPAGKAKATVAKHLSKPKVVVSTEKIPNETGHEAEI
ETVEEMPSSADKRDKSALARNKSETLAEDEKENRPIDLMQDPVKGRSNGKSTNKSNVRRT
NIKSTKVGPISSISESNTRVKTEAAYFILSGHRLQRKEFEQVIKRLSGRVCGVSSHKWSY
QATHFIAPDPLRRTEKFFAAAASGRWILNTDYLTASSQEGRLLAEEPYEWHRNGLSEDGA
INMEAPRKWRLVKEKTGHGAFYGMRIVVYGDCIAPPLDTLKRVIKAGDGTILATSPPYTK
FIGTGVDYAVVSPGMPHVDIWVQEFLKHEIPCVVADYLVEYVCKPGFSLGKHVLYGSHVW
AEKSFDKLKSKAEEIVAPEDLSSDDDDDDDNDNDNDIICQVCGSRDRGDVMLICGDESGS
VGCGVGTHIDCCDPPLTDVPEDDWFCSKCSTTRNSSNNPTKRKKNVLS
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagctaattacgtatcgcgagtgtttcgcggtgttcgttttgttctccgtggc
ttcaatcccgccgccgaaagccagatccggtttaagcttgaggatggcggtggacttgaa
gcagggcagtacggtgggagttgcacgcatgtcattgtcgataagattgcttatgacgat
cctctgtgtgttgctgctagaaaggatcggaagacgctcgtcactgcactctgggttgat
cacagtgctgatatcggaatgcccattgatgcttcttcggttatgtatagacctcctaaa
gacttggatggaataccaggtgcaaaagatttgataatgtgcttgactggttatctacgc
caggatcgggatgacattatgaccatggtcggcctgatgggtgcgaagttttctaaacca
ttggtagcaaacaaggttactcatctcatatgctataaatttgaaggagagaagtatctg
cttgccaagagattgggcacaataaagctagtcaatcatcgttggttggaagattgcttg
aaggaatgggtgcttcttcctgaagacaaatatagcaagagtggttacgaactagaaatg
acggaggaagaggccaaggattctgaggaagagggtgaagattctaagctgggacaatca
ggtgggagaaatatacaacaaagctcccttggttcaaaatttgggcatgctggaactcat
ggattgttgaaatcagtaaaagaggcatcgagcaacttaccagattctactggtccacgg
gttttgccaaatttcaataatggtgaagactctttaaccattcccggaaacaagagaaaa
tctgatcaagcctctagcttttataatgttgatgactcaaggatacgctatcagactcct
gatgtttctaaattacctgacaaatatacaaacaccactgagtctaagaatgctgatttt
ccaaaggcacttggctgccaggaccctggcaatacggcaaatactaaatcatctgttcag
cagtccggtctgcatggtaacactacggagtctaagaagttggtaagtgaattgacatca
acatctgcaagtgcagctggagttgcacattcaaatgaaaagcttagaatcacaagttat
tctatagagaaccaaagtgaattttctgtcccaaggatattagacggaagctccggcata
gaaggcaacaaatgtgaaaacagtaagattgacgaggcaattgggtttatgaaatctacc
agttttgaaatttctgggagaggaaatgattttactaaagaggatgaaccaattagttta
ttgtctcaaaagaggataaatgaaccttcttttacgaaattaaaatcaagaaaggtgtct
tctgatgcaaaagtctccacccaatcagcaaatggtaaacctcaaggattaaaagtgacg
tctcaggttgatgagccacccaaagccggtcctaacaccaactcactggcatttgatgag
catttctcaagaaatcccagcccagaatctgcacagtgggatagtgtctatcagaatagt
ccacaaacagctattcggagcttaagtgagtctaaaattagtggcaagcctgatgtcaca
agttctggaatgcgagaagttggtggtaatgaaatcgggctgcatattaccaaaagtctt
gattcttcatcaaagggaaacaaaatctcacataatgtggaatccggtggttgtactaac
ttggatttaagcaatgaagaatgtaataaactggttagaaaatcacccacaaagaagtca
gttgtcaagggaatttcgggttctaaacctagagtaggtgccactgctacacataaaaga
tcactttccttgaataaaactaaccttggtgaaggtgtagctttatgcagcgaaagcgaa
gagatttgtgatgcgaagatgcatcagggttgtcaccaaaaccgggatattaacaaaacg
atggagcaagatgcagtatgtaaaaatgcaaatgatgcttctgacagagctgagttcttg
acggatgaaacagaggctccagatgataaatatgaatttgagtttggaatggcactaaat
aaagaatcagtccatgcttcggaaaagccgaatagagcaacaaaagagaagtcagaagca
atttgccgtgcaacaaaatgtgaagaggcaaatcctcctaagagaggcacaaataaagca
gaaatacagaaaacgtcttcgctgttagtaaagactcaagcaagagaatgtgctgctggt
aaagccaatgccacagttaataaatacgtaggcgatgctggtgacagaactgagactttg
gatgatgaaaccgaagatccagatgacaaacttaaaaatgtgttaggagtggcacctgaa
gaagaattggtttatccttccaaaaaacgagataaatccactaaggttcacccttcaaga
aaacaagataaatctacagaagagaagccagaagcaatttgtcccgcgccaaaatgtgac
gaggcaatgcctcctcaaggtgtcacaaataaaaccgaaaaacagaagccatcttcactg
gtagtaaggaaacgtcctgctggtaaagccaaggccacagttgccaagcatttatcgaaa
cctaaagttgtagtatctacggagaagattcctaatgaaacggggcacgaggcagagata
gaaactgtggaagaaatgccctcttctgctgataaacgtgacaagtcggccttagcaaga
aataagtcagagactttagctgaagacgagaaggagaatagaccaattgatttaatgcag
gatcctgtgaagggtagaagcaatggcaaatcaaccaataaatctaatgtaaggcgaaca
aatatcaagtcgactaaagtggggcccatttcatctatatcagaatctaacacgagagta
aaaactgaagcggcatattttatattaagcggtcaccgtctacagagaaaagagtttgag
caagtaatcaagcgcttaagtggaagggtttgcggggtttcttctcacaagtggtcatat
caggcgacacacttcatagctccagaccccttacgcaggactgagaaattctttgctgcg
gctgcatcaggaaggtggattctgaatacggattacctaactgccagcagtcaggaagga
agactcttggcggaggagccgtatgagtggcacaggaatggtctcagtgaggatggagca
atcaatatggaggctccgagaaagtggcggctagttaaagaaaaaacaggtcatggcgcc
ttctatggaatgcgtattgttgtatacggtgattgcattgctccgcctttggatactctt
aaacgtgtcatcaaagctggcgatggaacaatattagccacttctcctccttatacaaaa
ttcattgggaccggagtcgactatgctgtagttagccctggcatgccacatgttgatatc
tgggtccaagagttcttaaaacatgagataccttgtgttgtagcggactatttggttgag
tatgtttgcaagcccgggttctccctcgggaagcatgtgttatacggctctcatgtttgg
gcagaaaaatcctttgataaacttaaaagcaaagcagaagagattgttgctcctgaggat
ttgagtagtgatgatgatgatgatgatgataatgataatgataatgatataatttgccaa
gtgtgtggatcccgcgacagaggagatgtaatgctgatttgtggtgatgaaagtggttct
gttgggtgtggagtgggtacccacatcgattgctgcgatcctccgctaacagacgtccct
gaggacgactggttttgttcaaaatgcagtaccacccgaaactcctcaaacaatcccact
aaaaggaaaaagaatgttttatcataa
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