KEGG   Vigna umbellata (ricebean): 124842436
Entry
124842436         CDS       T09662                                 
Name
(RefSeq) protein CIA1-like
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
vum  Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:vum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vum03036]
    124842436
   03400 DNA repair and recombination proteins [BR:vum03400]
    124842436
Chromosome and associated proteins [BR:vum03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    124842436
DNA repair and recombination proteins [BR:vum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     124842436
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WDR55 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_WDR19_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_WDR75_2nd Beta-prop_ELP1_1st Beta-prop_DCAF12 PROPPIN Beta-prop_HPS5 DUF4082 B-prop_COPA_B_2nd Frtz
Other DBs
NCBI-GeneID: 124842436
NCBI-ProteinID: XP_047174870
LinkDB
Position
Unknown
AA seq 341 aa
MELKEIQRLEGHTDGVWSLDWNPATGHAGIPLVFASCSGDKTVRIWEQNLSSGLWACKAV
LEETHTRTVRSCAWSPSGKLLATGSFDATTAIWENVGGDFECVSTLEGHENEVKSVCWNA
SGTLLATCSRDKSVWIWEVLPGNEFECVSVLQGHAQDVKMVKWHPTEDILFSCSYDNNIK
VWADEGDSDDWQCVQTLGVPNNGHTSTVWALSFNASGDRMVSCSDDLTVKVWGTENTEIQ
SGGGFAPWRHLCTLTGYHDRTIFSVHWSREGIFASGAADDAIRLFVDDNESQVGGPLYKL
LLKKEKAHDMDVNFVQWSPGEKPLLASASDDGTIKVWELIS
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggagttgaaagagattcagagactcgaaggtcacaccgatggggtttggagcttggat
tggaaccccgccactggacacgccggtattccgctcgtctttgcttcttgcagcggcgac
aaaaccgtccgaatctgggagcagaacctctcctctggtctatgggcttgcaaggcggtt
ttggaagaaacacacactcgaactgttcgatcttgtgcttggtcaccgtcggggaagctt
ttggccactggaagtttcgacgccaccactgccatttgggaaaatgttggtggcgatttt
gagtgtgtttctactttggagggacatgaaaatgaagtgaagagtgtgtgttggaatgcg
tctggcacgttgcttgcgacttgtagtagagataagtctgtttggatatgggaagttctg
cccgggaatgagtttgagtgcgtgtctgtgctgcaaggacacgcgcaggatgtgaaaatg
gtgaagtggcatcccacagaggatatcttattttcgtgtagttatgataataatattaag
gtttgggcggatgaaggtgatagtgacgattggcaatgcgtccaaacccttggggtgcct
aataacggacatacttccactgtctgggctctctccttcaatgcgagtggtgacagaatg
gtttcgtgtagcgatgatcttaccgtgaaggtctggggaacagaaaacacagagattcaa
tctggtggtgggtttgcaccctggagacatctttgcactcttacagggtatcatgatcgg
acaattttctcagttcattggtcaagagaaggtatctttgccagtggagccgctgatgat
gctatacgcctttttgtggatgacaatgaaagtcaggttggtggtcctctctacaagttg
ctgctaaagaaagagaaggcccatgacatggatgtaaattttgtgcagtggagccctggg
gagaagccgctgctagcctctgcaagcgatgatgggacaatcaaggtgtgggagttgata
tcataa

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