Vigna umbellata (ricebean): 124842608
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Entry
124842608 CDS
T09662
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124842608
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vum04121
]
124842608
Enzymes [BR:
vum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124842608
Ubiquitin system [BR:
vum04121
]
Ubiquitin ligases (E3)
HECT type E3
124842608
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
Arm
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
124842608
NCBI-ProteinID:
XP_047175078
LinkDB
All DBs
Position
Unknown
AA seq
1556 aa
AA seq
DB search
MGSRGQKRPDMVDELPADKRACSSLDFRPSSSNSSVQTHMNSIVEAHDHDMDTSSSASAS
SQSEGDPEKDSTYGSCDSDDMDQQHNSTLYEYHRRRLSSDHGKFKNIISSLSELTEPSCQ
LAVLTELCEVLSFCTEGSLSSMTSDLLSPLLVKLAKDEKNPDIMLFSIRAITYICDLYPR
SASFLVQHDAVPALCQRLFAIEYQDVAEQCLQALEKISREQPLACLEAGAIMAVLSYIDF
FSTSIQRVALSTVVNICKKLPSENPSLFMEAVPILCNLLQYEDRQLVENVATCLIKIVER
VGQSSEMLDELCKHGLIQQVTHLLSSNGQTALSQLIYNGLIGLLVKLSSGSLVAFRTLYE
LNISSILREILSTFDLSYGVSTSQLVGGHCNRVYEALKLLNELLPDRAKDQNDQLVLEKE
SFLDNHSDLLQRLGIDLFPMLIQVFNSGASLFVCHACLSVMYKIVSSSKSEVLVELLKNA
NISSFLAGVFTRKDHHMLMLALQIAEIILHNFSDNFLKLFIKEGVFFAIDTLLTPERSSK
LMYPVFSGIQMTSNSSQKSSSRETIKCLCYAFSTGQSPTSSEAKNCKLDKDSVYNLAEHI
KTKYLAPELFDSEKGLTDILQNLRELSNDLLSMSTDNGALGVVEEKINNILYQIMDKLTG
KEQVSTFEFIESGVVKSLVSYLSLGQYTRENKEVQGVCNYNAVIEKRFEALACVCASQHL
SGEIPISILIRNLQTALTSLEAFPIILSSGSKLRNSFATVPNRCSIPYPCLKVRFARGEG
EIFLSDYTEDFHTVDPFSCMHSIEAYLRPKVSPKSTEHSKSSSIQAVLQPESPPIQSPSH
AISVSVEIPVTLGPVDMMTDFPDTQKDQPKLTQLITDQVVIMNAGESSSSRTQGYAVQEL
QMNAEPSPKLEKQDPSFCSNEAAQKLVFYIEGQRLDQKLTLYQAILGHIVKQNDSFSSAK
LWSQVHTITYRRAVESEDIIPPQYHFSPQDISDDKVLAHYQHTPFFSDIFSCELVSDLEK
SSPTYDILFLLKCLERMNRLIFHLMSRERIWAFAKGKVDDLDSLKITVPSVPQNEFVSSK
LTEKLEQQMRDTLAVSVGGMPLWCSQLMTSCPFLFSFEARCKYFKLKAFGQPQVQPHLSH
NGSGAVIDRRLGPGGLPKKKFLVHRNRILESAAKMMELHACHKVVLEVEYDEEVGTGLGP
TLEFYTLVCHEFQKSGLGMWREDVSSFILKSNLQAEEMGIHSFYGLFPRPWSTMQDTSGD
IQFTDVAKKFFLLGQVVAKALQDGRILDLHFSKAFYKLILGKELSLYDILSFDPGLGRVL
QEFQALVIRKSIMESVNGGNSELQYGKSFRDTSIEDLCLDFTLPGYPDIVLASGTDHSMV
NMRNLEDYVSRIVDATVRSGISRQVEAFKSGFNQVFSIEHLQIFNEEEVERMLCGEYDSW
AINELGDNIKFDHGYTASSPPIVNLLEIVREFDHEQRRAFLQFVTGAPRLPPGGLASLNP
KLTIVRKHCNNRADTDLPSVMTCANYLKLPPYSSKERMKEKLLYAITEGQGSFHLS
NT seq
4671 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtagaggccaaaagcgtccggacatggtggatgaactgcctgctgataagcgt
gcgtgcagttcattggatttcagaccaagttcttcaaactcatcagttcaaacacacatg
aattcaatagtggaggcacatgatcacgacatggatacttcatcgtctgcttcagcttct
agccaatcagaaggagatcccgagaaggattcaacttatgggtcgtgtgattcagatgac
atggatcagcagcataatagcaccctttatgagtatcatagaaggagactatccagtgat
catggaaaatttaagaatatcataagtagcttgagtgaactgactgaaccctcttgtcaa
ttagctgtactcactgaactctgtgaagttttgtccttttgtacagagggttcactatcc
agcatgacttctgacttgttatcaccattactggtaaagcttgcaaaggatgagaagaac
ccagatatcatgttgttttctataagggccataacctatatatgtgatttgtatcctaga
tcagctagttttcttgttcaacatgatgctgttccagccttatgtcaaagattatttgct
attgagtatcaagatgtagctgaacagtgtctccaagcattggaaaagatatcgagagaa
caaccccttgcttgcttagaggctggggcaattatggccgttctcagttatattgacttc
ttctcaacaagcatccagagagtagctctttctactgtggtgaacatatgcaagaagctt
ccttctgaaaacccttcactttttatggaggctgttcctatattatgcaatcttcttcag
tacgaggataggcagcttgtcgaaaatgttgctacatgcttaataaaaattgttgaacga
gttgggcagtcctcagaaatgttggatgagctttgtaagcatgggctgattcaacaggtc
acgcatcttttaagttcaaatggtcagactgccctatctcaattaatttacaatggattg
ataggactacttgtcaaactttcatctggatcacttgtagccttcaggactttatatgaa
ctcaatataagcagcatattgagagaaatattatctacatttgacctctcatatggagta
tcaacgtcacagctcgttggtggacactgtaatcgggtatatgaagcactcaaactgcta
aatgaacttctccctgatcgggctaaagatcagaatgatcaactggtgctagaaaaagaa
tcctttctagataatcactcagatctcctgcaaaggcttggaatcgatttgttccccatg
ttaatccaggtgttcaattctggtgcaagtttatttgtttgccacgcatgtctgtctgtt
atgtacaagatagtcagttcaagtaaatctgaggtgcttgttgaattgctaaaaaatgcc
aatatttcaagttttttggctggagttttcactagaaaggatcaccacatgctaatgtta
gcattacaaattgctgagattatccttcacaatttttcagataatttcttaaagttgttt
ataaaggaaggagtcttttttgccattgatacactactaacaccggaaagatcttcaaaa
ttgatgtacccggtgtttagtggcattcaaatgacatcgaactctagtcaaaagtcttcc
tcaagagagaccatcaagtgcttatgttatgcattttcaactggccaatctcctacatca
tcagaagccaaaaattgcaaacttgataaagattctgtttataatctagcagagcatata
aagacaaaatatttagctccagaattatttgattctgagaaaggattgactgatatttta
caaaatcttagagaactgtctaatgatttgttgagcatgtctactgacaatggtgctctt
ggtgtggttgaggagaagatcaataatatcttgtatcaaattatggacaagcttactggc
aaggaacaagtttctacttttgaatttattgaaagtggagttgtgaaatcacttgttagt
tatttatctctgggccagtatacgagggaaaacaaagaggtacagggtgtctgtaattat
aatgctgtcatagaaaaacgatttgaggctttagcttgtgtgtgtgcttctcagcatctc
tctggtgaaatacccatttctatattaatcaggaacttgcaaactgcactaacttcattg
gaagctttccctattattctgagcagtggatcgaaactcagaaattcatttgctactgtt
cctaataggtgttcaattccttacccttgtctgaaagtacgttttgcaaggggcgaggga
gagattttcctgagcgactacactgaggattttcatactgttgatcctttttcttgtatg
cattctattgaagcatatctaaggccaaaggtcagtccaaaaagcacagagcattctaaa
tcatcatccatccaagcagtgttgcaacccgaaagtcctccaattcaatcaccatcacat
gcaatttcagtctcagttgaaattcctgttactttggggcctgttgacatgatgacagat
ttccctgatacacagaaggatcaaccgaagttgacgcaactcataactgatcaagtagtc
atcatgaatgctggggaatcctcctcctctagaactcagggctatgccgtacaagaactg
caaatgaatgcagaaccaagcccaaaactagaaaaacaggatccttcattttgtagcaac
gaagctgctcaaaagcttgtcttttacattgaaggacaacgtctggatcaaaaattgact
ttatatcaggcaattcttggccatatagtaaaacaaaatgattccttttccagtgcaaaa
ctgtggagtcaggtgcatacaataacctacagaagggctgttgaatctgaggacataata
cctccacaatatcacttttcacctcaggatatctctgatgataaagttttagctcattat
cagcatactccatttttctcagatatattctcttgtgaacttgtttctgatctggagaag
tcaagtccaacttatgatattttgtttcttctcaaatgcttggaaagaatgaacagactt
atatttcaccttatgtctcgtgaaaggatttgggcttttgccaaagggaaagtggacgac
ttggatagcctaaaaataactgttccttctgtcccacaaaatgagtttgtaagcagtaaa
ttgacagagaagctagagcaacagatgagggacactttggctgtctccgttggtggtatg
ccattgtggtgtagtcaattaatgacatcatgtcctttcttatttagtttcgaggcaaga
tgcaagtacttcaaattgaaagcatttggtcagccacaagttcaacctcacttgtctcac
aatggctcaggagcagtgattgatagacgattgggccctggtggattgccaaaaaagaaa
tttttagttcatcgcaaccggattttggaatctgctgcaaaaatgatggaactgcatgcc
tgtcacaaagttgttcttgaagtggaatatgatgaagaagtgggcactggtcttggacca
accttggaattttataccttagtctgccatgagttccagaaatctggcttgggcatgtgg
agagaagatgtttcttcgttcatcctcaagtcaaatttgcaggctgaggaaatgggaatt
cattctttttatggactctttccccgtccgtggtcaacaatgcaagatacatctggtgac
atacagttcactgacgtagcaaagaaatttttccttctaggccaagttgttgctaaggca
cttcaagatgggaggatcttagatctccacttctccaaagctttctataaacttattctt
ggaaaggaactctctctttacgacatactatcctttgatcctgggcttggtagggtgctg
caagagtttcaagcactagttatcaggaaaagtattatggaatctgtcaatggagggaat
tctgagttgcaatatggaaaaagctttcgagataccagtattgaagatctctgtcttgat
tttacccttcctgggtatcctgatattgttcttgcttcagggactgatcattccatggta
aatatgagaaatctagaggattatgtttcacgtattgtcgatgcaacagtgaggtctgga
atttcaagacaggtggaagcttttaaatctggctttaaccaggttttctccattgaacat
cttcagattttcaatgaagaagaagttgagcgaatgctttgtggagagtatgactcttgg
gcaatcaacgagcttggagataacattaagtttgaccatgggtacactgctagcagtcct
cccattgttaatttgttggagattgtccgggagtttgatcatgaacagcggcgagcattt
ctgcagtttgtgactggtgcacctcgacttcctccaggagggttggcatctctgaatcca
aagttaactattgtccgaaagcattgtaacaaccgggcagacacagatctaccaagcgtg
atgacttgtgctaattatctcaagctacctccgtactcatcaaaagagagaatgaaagaa
aagttgttgtatgccataacagagggtcaaggatctttccacctttcgtaa
DBGET
integrated database retrieval system
