Vigna umbellata (ricebean): 124842875
Help
Entry
124842875 CDS
T09662
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC124842875
KO
K08518
syntaxin-binding protein 5
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vum04131
]
124842875
Membrane trafficking [BR:
vum04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124842875
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
124842875
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_VPS8
WD40
WDR55
Beta-prop_HPS5
Beta-prop_RIG_2nd
Synaptobrevin
EIF3I
Beta-prop_WDR90_POC16_2nd
Lgl_C
PQQ_2
PQQ
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
FAM186A-B_C
DUF3679
Motif
Other DBs
NCBI-GeneID:
124842875
NCBI-ProteinID:
XP_047175426
LinkDB
All DBs
Position
Unknown
AA seq
1153 aa
AA seq
DB search
MFSRLFNKSPPEQHPQQDVVHDSVPSANFDPQVVFHYGVPSTASILAFDHFQNLLAMGTL
DGRIKVCGGNNIEGILISPKQAPFKNLEFLENQGFLASVSNDNEIQVWDLKSKQIASALQ
WESIITAFSVIYGTSYMYVGTEHGMVYVLMFDSEDRKIKILPYYVPTNVISEAAGMSLDQ
VSVVRVLHQPCSDGNRFLIAYENGLMVLWDASKDRIVLMRNHKDIKLKRKIVASYLNGPR
PQLSNDKLDHEEQEKEISSLSWASNDGSVVVVGYVDGDIMFWDLSSADFPKDQQVKTLSN
DVVKLQLLSADTRLPITVLHWLANNKGGKLFVYGGCEIGSEEVLTVLSIDWSGGLQNLRC
TGRIDVTLHGSFADMALLCRDCHTEGTCNVLSVLTSPGQLDIYDNDCLSSLMSQKEKKTS
VPTVQYPILVPTLEPHMTTSRLDVVCQDVKSFKALFKILEAGKHHSIQNQKSIGTKWPLT
GGVPGLPFKENHPIIQIYIAGYQDGSVQIWDATYPALSIAYNIKSEVGDVKIGNASASVS
ALGFCPDTLHLSVGDESGVVRLYALIRSSNTTSVHLVTENGTEVHDRHQGDGPNCKAVFT
LQNSAVYGLQFANHGRRLVVGYEHGQVAMLDISSSTVLFLTKTESNTSSAVVSMNAIFKD
SSSSNTQDSVSDISDNPGMGLVYVVTRDAHFVAIDAVTGNIVCSRTTSPRIKSNAISMYI
IGNTYTLPAEKXSPNSPQKSDSAMQANVKSENAQLEVEIATTVENSYFGQILSNSLILLC
YESELSIHTLNFVFEGSSNYFRKVDLVQRCCWTTIFKKNEKECVLVLLYQRGDIELRSLP
ALEVLGEISLMSILRWNLEINMEKTICSSSNGKIILVNENETACISLLNCENELWIPESF
PCLHDEVLAAAVDATASLSQNQTERQGASGIFVNIAKNFKAGIADQNANQAVQTNRLENL
KQLFSSPPFLKSSSSTVDNQDPFSLDIDDIQIDEVVVFSSPKKIDIDKRDKEKETDRPKL
FDIGKGTDILKLFNDKGKATDKQKLFEDASTDSKPRARTTEEIKAKYRKTGTGVNRSSEN
PVIYAFYSHVLTFHWFQDASAAAALARDKLLERQQKLQLLNEHTEELQNGAQDFASMATE
LAKRMENRKWWQL
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgttctctcgattattcaacaaatcaccaccggaacaacatcctcagcaggacgtggtg
cacgacagtgttccgtcggcgaatttcgatccgcaagttgtttttcactatggcgttcca
tctaccgcgtctattcttgcttttgatcacttccaaaacctattagcaatgggaacactc
gatggaaggataaaggtgtgcggtggcaacaatattgaagggattctgatctctcccaag
caagcacccttcaagaatttagagttcttggaaaaccaaggtttccttgccagcgtctca
aacgataatgaaatacaggtttgggatttaaaaagcaaacaaattgcttctgccttgcag
tgggaatccatcataactgctttctctgttatttatggcaccagttacatgtacgttgga
actgagcatgggatggtatatgtgttgatgttcgattctgaagacagaaaaattaaaata
ttgccctattatgttcccacaaatgttatatctgaagcagctggaatgtcacttgatcag
gtttcagttgtcagagttctccatcaaccatgttctgatggaaacagatttctaattgca
tatgaaaatggtttgatggtactctgggatgcttctaaagatcgaattgttctcatgaga
aaccacaaagatatcaaattaaagagaaaaatcgtggctagttatctaaatggccctagg
cctcagctttctaatgataaactagaccatgaagagcaggaaaaggagataagctctcta
tcttgggcatctaatgatggatcagttgttgttgttggttatgtcgatggtgatataatg
ttttgggatttgtcaagtgctgacttccccaaagatcaacaagtcaaaacattgtcgaat
gatgttgtcaagcttcaattattgtcagctgacacaagactccctattactgttctacat
tggttggccaataacaaaggggggaaactttttgtctatggtggctgtgagattgggtct
gaagaagttctgacggttttgagcattgattggtccggtggacttcaaaatctaaggtgt
accggccgcattgatgttactcttcatggttcttttgctgatatggccttgttatgtcgt
gattgccatactgagggaacttgtaatgtgctatctgtattgacaagtcctggacaactg
gatatttatgacaatgattgtctgtcttctttgatgtcccagaaagaaaagaagacttct
gttcccacagtgcagtatcccatcctcgtacccactcttgaaccacacatgacaacttca
aggcttgatgtggtatgtcaagatgtaaagtcatttaaagccttgttcaagattcttgaa
gctggaaagcatcattcaatacaaaatcagaaaagtattggtacaaagtggcctttgact
ggtggtgttccaggtcttcctttcaaagaaaaccatcctatcattcaaatatacatagct
ggttaccaagatggatctgttcagatatgggatgccacgtatcctgctttgtcaattgct
tacaatataaaatctgaggttggtgatgttaaaattggcaatgcaagtgcgtcagtatca
gcattgggcttttgccctgatactctacatctctctgttggtgatgaaagtggtgttgta
cgtctatatgctctaataagaagctcaaataccacatctgtgcacttagtgacagaaaat
ggaactgaagttcatgacaggcatcaaggggatggacctaattgcaaagctgtgtttacc
cttcaaaattctgctgtatacggcttacaatttgcaaaccatggaagaagacttgttgtt
ggatatgaacatgggcaggtggctatgcttgatataagttcatcaacagttttgtttctc
acgaaaactgaatctaacacttcttcggcagttgtttctatgaatgcaatatttaaagac
agtagctcgagtaatacacaggactctgtatctgatatttctgacaatcctggaatgggg
ctagtctatgttgtgacaagggatgcacactttgttgcaatagatgctgtgacagggaat
atagtttgcagtaggaccactagccccagaataaaatcaaatgcaatttcaatgtatatt
ataggcaacacttataccctaccagctgaaaaataatcccccaactcgcctcagaagagt
gattctgcaatgcaagcaaacgtcaaatctgaaaatgcacaacttgaagttgaaattgct
actaccgtagaaaattcatattttgggcagatattatcgaactcactcattttactttgt
tatgagagcgaattgagcatacacactttaaattttgtgtttgagggtagtagtaactac
ttccgcaaggtggaccttgttcaacgatgctgctggactacaatctttaagaaaaatgaa
aaagagtgtgttctggttcttctgtatcaaaggggggacattgaattaaggtccttgcca
gctttggaagtgttaggagaaatttctttaatgtcaatactcagatggaacttggaaatt
aacatggagaagacaatatgttcttcgtcaaatggaaaaattatcctggtcaatgagaat
gaaactgcctgcatatcactattgaactgtgaaaatgagctctggattccagagtctttt
ccatgtcttcatgatgaagttcttgcagctgcagtagatgccacagcaagtctatctcaa
aaccaaactgaaagacagggagcatctggcatctttgttaatatagctaagaactttaaa
gcggggatagcagatcagaatgcaaatcaagcagttcaaactaatagattggaaaatttg
aaacaattattctctagtcctcctttcttaaagtcttcctcaagcacagtagataaccaa
gatcctttttcccttgacatagatgacattcaaattgatgaagttgtagtcttttcatct
ccaaagaaaatcgacattgacaagagagataaagagaaagaaacagacagaccgaaatta
tttgatatagggaaaggaacagacatactgaaattatttaatgataaagggaaagcaacg
gacaagcagaaactatttgaagatgcaagcacagactcgaaaccaagagctagaacaact
gaagaaattaaagctaaatacagaaagacggggacgggggtaaatcgcagttctgaaaac
cctgtaatttacgcattttactcacatgtcttgacttttcactggtttcaggatgcctcc
gcagcagctgcacttgcaagggataaacttctagagcggcaacaaaagctccagttgctc
aacgaacacactgaggaattgcaaaatggagcgcaagactttgcatccatggcaactgaa
cttgctaaaagaatggaaaatcgtaaatggtggcagttatga
DBGET
integrated database retrieval system
