KEGG   Vigna umbellata (ricebean): 124842901
Entry
124842901         CDS       T09662                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
vum  Vigna umbellata (ricebean)
Pathway
vum03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    124842901
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vum03400]
    124842901
DNA repair and recombination proteins [BR:vum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     124842901
SSDB
Motif
Pfam: XPG_N XPG_I XPG_I_2 UBM
Other DBs
NCBI-GeneID: 124842901
NCBI-ProteinID: XP_047175454
LinkDB
Position
Unknown
AA seq 1707 aa
MGVHGLWELLSPVGRRVSVETLAGKTLAVDASIWMVQFMKAMRDEKGEMVRNAHLLGFFR
RICKLLFLRTKPVFVFDGGTPALKRRTVIARRRQRENAQAKVRKTAEKMLLNHLKTLRLK
ELADDIKSQRMQKNSNTKGQNGSKEKDFVGSDSRGSHVKELDEMSAAKFATKEDINSSQA
TLSSSYNQEELDEMLAASIAAEESGKHARKGVPSIIINPSEEEHGAEEQILLPSVNAEVD
IAVLAALPQSMQLDILAQLKGKKKEVLLKEVYNHEQHDVDYQGKGKGILLSEAGMVGCSS
RHDTVAPRTDNQDSIDEMLAASIALEENEKLVNNASTSVGASTIEEDEVDYDEDEEMILP
AMHGEVDPLVLASLPPSMQLDLLVQMRERLIAENRQKYQKVKKDPAKFSELQIQAYLKTV
AFRREINEVQKAAAGGGVEGVQTSRIASEANREYIFSSSFTGDKHELTSTGLEKNKSTKE
KAQGTHYSQNLANSILAGNDFNKSSELISNEPGEPADENIQTYIDDRGQFRVSRLRAMGM
RMTRDIQRNLDLMKEFEQESAQVNKASNIGTIKNGETKGSSESSGIQPVGKSQEVNVDLV
GENVQNEQIMLDQNASIDISFEYGCENEFANGEDDIFSSLVGGNPLAIFDTDDSAATVQP
SHSDWEEGIVEGKSTVFPKQDKVELKSSVADDDNNNESEVEWEEGDCDGANSSLLSGKYA
SRGQLEEESNLQEAIRRSLESAGDGKHKCMSLLDAQSNTYENKLDHDFEHGDHSEHGDHS
DPMALNENTRFLNNKNKMVGITLCREDGTEKKELLETEDRDKTPDFVSVNNAQTFHFHGS
PSKPALTFISDKTETLIDTTCRWDSHPCSEDSISDTNIMTKDQVPVVEKKLSDEHDNDKV
SSYHKYTPKAVPVGATEEEKKNYIKEPEPFSNCTDTTKPTIHLGESSLKGVTEELIEPNL
ASEGNNGIFFDKRNSSHGSDTVNSPGDFPALATQVSLEKEIHILGQEYINLENEQRKLER
NAESVNSELFTECQELLQMFGLPYIIAPMEAEAQCAYLELEKLVDGVVTDDSDVLLFGAR
SVYKNIFDDRKYVETYFMEDIEKELGLTREKLIRMALLLGSDYTEGVSGIGIVNAIEVLN
AFPEEDGLLKFRKWVESPDPTILGRLDAKSGSNSRKKGSKVEEKINSLNCDAKESPSEQN
LPHALEQNKLPDYIQETKQTFFNKHRNVSKNWHIPSSFPSETVISAYCSPHVDKSTEPFT
WGKPDHLVLRKLCWEKFGWIGQKADELLLPVLKEYNKRETQLRLEAFYSFNERFAKIRSK
RIKKAVKGITGKLPSDMIDDSAEVLSKSRKIGREPEDSTLEISGGTDKRLERQSKSKIKQ
STKRKNDTVAKEQSKKKKDNDDPSSAPGTSEMENLQPSMQTEEQCDGKALIQNTSGRGRH
RGMGIKRGRDNENLSSSASSDIDDQGSRVHVDKFSEHVRKSLRSRKPVNYSFEDPEDEDA
EDADDAFDHSNRTGPIEEKLSQIHGASEDGPTDFSAMNFPLRENSPTDPFKSEGPFCVHA
GEINHPSTGNHDSSTGNHDSSDDYLKMGGGFCLDDGETDKLDTIDDVNTATVDSTQDFSH
FSDCLDETNRDKNSSDILFSGTEKPENGSEGGGDFYDFGIKRNDLVNTSSYDHSDVGILK
PENVHNNSGASAGVFSAMPFLRKRRKK
NT seq 5124 nt   +upstreamnt  +downstreamnt
atgggagtccacggtctctgggaactactctcccccgtcggtcgccgcgtctccgtggaa
accctcgccgggaaaaccctcgccgttgatgcgagcatatggatggtgcagtttatgaaa
gcgatgcgcgacgagaagggggaaatggttcgcaacgcccatttgctgggatttttccga
cgcatttgcaagcttctattcctccgcactaagccggtcttcgtcttcgacggcgggacc
cccgccctcaagcgccgcaccgtcattgcccgccgccggcagcgcgaaaacgctcaagct
aaagtccgcaaaactgcggagaaaatgctgctcaatcatttaaagacactaagattgaag
gaactggctgatgatattaagagccagaggatgcagaagaatagtaatactaagggtcag
aatggatctaaagaaaaggactttgttggtagtgattcaagaggaagtcacgtgaaagag
ctagatgaaatgtctgcagctaaatttgcaactaaggaggacataaattcttcacaggca
acattatcctcaagttacaaccaggaggaacttgatgaaatgttggcagcatctatagct
gcagaggaaagtggaaaacatgctagaaaaggagtgccgtctattataattaatccttca
gaggaagaacatggcgcagaagaacagattctactgccatcagtaaatgcagaagttgat
atagctgtattggctgctttgccacagtctatgcaactcgatattcttgcacagctaaaa
ggaaagaaaaaggaagtgttactaaaggaagtttacaatcacgaacaacatgatgtcgat
tatcagggcaagggcaaagggattctgctcagtgaagctggcatggttggttgtagctcc
agacatgacactgttgcaccaaggactgacaatcaagactcaattgacgaaatgttggct
gcatctattgctctggaggaaaatgaaaagttagtaaataatgcatcaacttctgttggg
gcttccactattgaggaagatgaagttgactatgacgaagatgaagagatgatactgcca
gctatgcatggtgaagttgatccacttgttctagcctcattacctccatcaatgcagctg
gaccttcttgttcagatgagagagcgtttaattgcagagaacagacagaagtatcagaaa
gtcaagaaggatcctgcaaaattctctgagctacaaatacaagcttaccttaaaactgtt
gctttcagacgggagataaatgaagtgcagaaagctgcagctggaggaggagtagagggt
gtacagacttcacggattgcatctgaagccaacagagaatatatattttcatcatctttt
actggtgataaacatgaacttacctccaccggcttagagaaaaataaaagtacaaaagag
aaggcacaaggaacacattattctcagaatcttgcaaatagcattttggctggaaatgat
tttaataaatcaagtgaattgatttccaatgaacctggtgagcctgctgatgaaaatatt
cagacatatattgatgacagaggtcaatttcgtgtaagtagattgagagcaatggggatg
cgtatgacccgggatatacaaagaaatttggatttgatgaaggagttcgagcaggaaagt
gcacaggtgaacaaggcttcaaatattggaacaattaaaaatggagaaactaagggttca
tcagaaagttctgggatccagcctgttggtaaatcacaagaggtgaatgttgacttagtt
ggagagaatgtgcaaaatgaacaaattatgctagaccagaatgcttctatcgatatatct
tttgaatatggttgcgaaaatgagtttgcaaatggtgaggatgatatattttctagttta
gtaggaggaaatccattggcgatatttgacactgatgattctgcagcaacagtgcaacct
tctcattctgattgggaagaaggaatagttgaaggtaagagtactgtttttcccaaacag
gataaggtggaattgaagtcttctgttgcagatgacgataataataatgaaagtgaagtg
gaatgggaggaaggagattgtgatggtgctaacagcagcttactgtcaggaaaatatgca
tcccgagggcagttggaggaggagtccaatttgcaagaggcaataaggagaagtcttgaa
agtgcaggggatggaaaacacaaatgtatgtcattgcttgatgcgcaatcaaatacttat
gagaacaaattggatcacgattttgaacatggtgatcattctgaacatggtgatcattct
gacccaatggctttaaatgagaacactaggttcctgaataataaaaataaaatggtggga
atcactttgtgtagggaagatggtactgaaaaaaaggaattacttgaaactgaagataga
gataaaacgcctgattttgtttccgttaataatgcacaaactttccattttcatggaagt
ccttcaaagccagctttgacttttatttcagataaaactgagacattgattgacacaact
tgcagatgggacagtcacccttgttctgaagattcaatttcagatacaaatataatgacg
aaggaccaggtccctgtggttgaaaagaagttatctgatgaacatgataatgataaagtg
tcttcctatcataagtatacacccaaggctgttccagttggcgcaactgaagaggagaaa
aagaactatattaaggaacctgaaccatttagtaattgtactgacactaccaaacccact
attcatttgggggagtcatccttgaaaggagtaacagaagagcttattgagccaaacttg
gcttcagagggtaataatggaattttttttgacaaaaggaacagtagccatggcagtgat
acggttaacagcccaggggattttcctgctctagcaactcaggttagcctggagaaagaa
attcacattcttggtcaagaatatattaacctagagaatgagcagaggaagctagagcgg
aatgcagagtcagtaaacagtgaattattcactgaatgtcaggaactactgcaaatgttt
ggcttgccatatattattgctccaatggaagcagaagctcaatgtgcttatttggaactt
gagaaactagttgatggtgttgtaactgatgactctgatgtccttctatttggggcacgc
agtgtctacaaaaatatatttgatgaccgaaaatatgtagagacatacttcatggaggac
attgaaaaggagcttggactgactagagaaaaattaatacgcatggctctacttcttggg
agtgattataccgaaggtgtaagtgggattggcatcgttaatgctattgaggttttgaat
gcattccctgaggaagatggcctcctgaaattccggaaatgggttgagtcaccagatccc
accatccttggaaggttggatgcaaaaagtggatcaaattccagaaagaaaggatcaaaa
gttgaagaaaagataaattccttaaattgtgatgctaaagagtctccatcagagcagaac
ctcccccatgcgctggagcaaaataagttgccagattacattcaagaaacaaagcaaact
ttcttcaataagcatagaaatgttagcaagaattggcacatcccttcttcttttccaagt
gaaacagttatttctgcttattgttctccacatgttgataaatcaaccgagcctttcaca
tgggggaagccagatcaccttgttcttcggaaattgtgctgggagaaatttggctggatt
ggccagaaagcagacgaattgctattacctgtgttaaaggagtataataaacgtgagact
caattgcggttggaagcattttacagttttaatgagagatttgcgaaaatccgtagcaaa
agaattaagaaggcagtaaaaggaataactggtaagctgccttcagatatgatagatgat
tctgcagaggtgttgtccaagagtaggaagattgggagagaacccgaggatagcacatta
gagatttcagggggaacagacaaacgtcttgaacgtcaaagcaaatcaaaaataaaacag
tcaacgaaaaggaagaatgatactgttgccaaggaacagtcaaagaaaaagaaagacaac
gatgatccgtcttcagcacctggtacatcagagatggagaatttacagccaagtatgcag
acagaagaacagtgtgatggtaaggcattaattcagaatacaagtggccgaggaagacat
agaggtatgggaataaaaagaggaagggacaatgagaatctcagttcatctgctagcagt
gacattgatgatcagggatcaagagtgcatgtggataagttttcagaacacgtgagaaag
tcattgcgatctcggaaacctgtcaactattctttcgaagatcctgaagatgaagatgcc
gaagatgccgatgatgcctttgatcatagtaatcggactggtccaattgaagaaaaatta
tctcagattcatggtgcatctgaagatggtccaacagatttcagtgcaatgaattttcct
ttaagggagaactcaccaaccgaccctttcaagtcagaaggtccgttttgcgtgcatgca
ggtgaaattaatcatcctagtactggcaatcatgattcttctactggaaatcatgactct
tctgatgactaccttaaaatgggaggtggattctgtttagatgatggtgagacagacaag
ctggacacaattgacgatgtcaatactgccacagtggattctactcaagacttttcacac
ttttctgattgtttggatgaaactaaccgtgataaaaacagttcagatatattattttct
ggcactgaaaagcctgaaaatgggtcagaaggtggaggagacttttatgactttggtata
aagcgaaatgaccttgtaaatactagtagttatgatcattctgacgtagggatcttgaaa
ccagagaatgttcataacaatagtggagcctccgctggagttttcagtgctatgcctttt
ttgaggaaaagaaggaaaaagtga

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