Vigna umbellata (ricebean): 124842956
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Entry
124842956 CDS
T09662
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03030
DNA replication
vum03410
Base excision repair
vum03420
Nucleotide excision repair
vum03430
Mismatch repair
vum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124842956
03410 Base excision repair
124842956
03420 Nucleotide excision repair
124842956
03430 Mismatch repair
124842956
03440 Homologous recombination
124842956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vum03032
]
124842956
03400 DNA repair and recombination proteins [BR:
vum03400
]
124842956
Enzymes [BR:
vum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124842956
DNA replication proteins [BR:
vum03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
124842956
DNA repair and recombination proteins [BR:
vum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
124842956
MMR (mismatch excision repair)
DNA polymerase delta complex
124842956
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
divDNApol
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
124842956
NCBI-ProteinID:
XP_047175534
LinkDB
All DBs
Position
Unknown
AA seq
995 aa
AA seq
DB search
MSNASRKRAASAVAPQPPPPKQVLMTQEEDFMDEDVFIDQTLVSEDEESLILRDIEQRQA
LAARLSKWTRPPLSDDYVAQSRGVVFQQLEIDYVIGESHRELLPNLSGPAAIIRIFGVTK
EGHSVCCNVHGFEPYFYISCPPGMGPDDISHFHQALEGRMREANRNSNVGKFVRRIEMVQ
RRSIMYYQQSDSQPFLKIVVALPTMVASCRGILDRGIQLDGLGMKSFLTYESNVLFALRF
MIDCNIVGGNWIEILAGKYKKIVKSLSYCQLEFDCLYSDLISHAPEGEYSKMAPFRILSF
DIECAGRKGHFPEPSHDPVIQIANLVTLQGEDQPLIRNVMTLKSCSPIVGVDVMSFDTER
EVLLAWRVIYLSSKRISELIPSYGESIMGILNVRNRPFKIHTLLVNVQDAYLPQRLLDKL
MFIYNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKARQKNLVIPNVKQVGSEQGTFEGA
TVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCTLVTSEDARKLNIPSESLNRTPSGE
TFVKSNLQKGILPEILEELLTARKRAKADLKEAKDPLERAVLDGRQLALKISANSVYGFT
GATIGQLPCLEISSSVTSYGRQMIEHTKKLVEDKFTTLNGYEHNAEVIYGDTDSVMVQFG
VSAVEQAMNLGREAAEYISGTFTKPIKLEFEKVYYPYLLISKKRYAGLFWTKPDKFDKMD
TKGIETVRRDNCLLVKNLVNDCLHKILIDRDIPGAVQYVKNAISDLLRNRMDLSLLVITK
GLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKGAKGAKAYEKSEDPIYV
LENNIPIDAQYYLENQISKPILRIFEPILKNASRELLHGSHTRSISISTPSNSGLWKFTK
KELTCIGCKAVLGKDHHTVCSHCKGREAELYCKTVSRVSELEMHFGKLWTQCQECQGSLH
QDILCTSRDCPIFYRRKKAQKEMSEAQSQLDRWSF
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgcttcacgaaagcgcgcggcgtcggcggtggcgccacaacctccgccgcca
aagcaagtcttaatgactcaggaagaggacttcatggacgaagacgtgttcatcgaccaa
acccttgtttcagaagatgaagagtccctcattctccgcgacatcgagcagcgccaggcc
ctcgccgcgcggctatccaagtggacgcgtcctcctctctccgatgattacgtcgcacaa
tctcgaggcgtcgtttttcagcagttggagattgattatgtgatcggggagagtcacagg
gagttgctgccgaacttgtctggacctgctgctattatcagaatttttggtgttacgaaa
gaaggacacagtgtttgctgcaatgttcacggctttgaaccatatttctacatctcttgc
cctcctggaatgggtccagatgatatctctcattttcaccaagcacttgagggaaggatg
agagaagccaatagaaatagtaatgtaggaaaattcgttcgccgcattgaaatggtgcag
aggagaagtattatgtactatcagcaatctgattctcagccctttctcaaaatagtagtt
gcactcccaacaatggttgccagctgccgtggtattcttgataggggtattcagcttgat
ggtctgggaatgaagagcttcttgacttatgaaagcaatgtactttttgctctacggttc
atgattgattgcaacatagttggtggaaattggattgaaattctggcaggaaaatataaa
aagatagtgaaaagcttgtcttattgccagttggagtttgattgcctgtattctgatttg
attagtcatgctccagaaggggagtattcaaagatggctccatttcgcatattgagtttt
gacattgagtgtgctggtcgtaaaggtcactttcccgagcctagccatgatcctgttatc
cagattgctaatttggttactttacaaggagaagaccagccacttattcgcaatgtgatg
acccttaaatcatgttctcctattgttggtgttgatgtgatgtcatttgatacggaaaga
gaagtcctacttgcttggagggtaatatacttatcaagcaaaagaatttcagaactcatc
ccctcatatggtgaatccattatgggtattctaaatgtgagaaatcgaccattcaaaatt
catactctgctcgtcaatgtgcaggatgcatatcttcctcagcggcttttggataaactg
atgttcatttacaactatgtggagatggctcgagtaacaggtgttccaatttcttttcta
ctttccagaggccaaagcattaaggtactttctcaacttcttaggaaagcaagacagaag
aatctggtcattcctaatgtcaagcaggttgggtctgaacaaggaacatttgaaggtgcc
actgtgttggaggcaagagctggattttatgaaaaaccaatcgctacgttagattttgca
tccctgtatccatctattatgatggcctataatttatgttattgcactctggtgacttct
gaagatgctcgcaagctcaacatcccttcagagtccttgaacagaactccatctggtgaa
acatttgttaaatcaaatctgcagaagggaatactgcctgaaatacttgaagagctatta
acagcccgtaaaagggcaaaagcagatttaaaggaggcaaaggatcccctggagagggca
gtgctagatggtaggcagctggccctgaaaattagtgcaaattccgtctatgggtttact
ggggctaccattggtcagttaccatgtttagagatatcatcgagtgtaacaagctatggt
cgacaaatgattgagcacacaaaaaaacttgtggaagataaattcacgacacttaatggc
tatgaacacaatgctgaggtaatatatggagacacggattcagtcatggtacaatttggt
gtttctgcagtagaacaggccatgaacttggggcgagaagctgccgaatatataagtgga
actttcacaaaacccatcaagctagaatttgagaaggtttattatccatatctcttgatt
agcaagaagagatatgctggtttgttttggacaaaaccagacaagttcgacaaaatggac
actaaaggtattgaaacagttcgaagagacaattgtttgttggtcaaaaacctggtgaat
gattgtcttcacaaaatactgattgacagggacattccaggggctgtccagtatgtcaag
aacgcaatttcagatctactcaggaatcgtatggatttatcactgttggttattacaaag
ggtttaacaaagacaggagatgattatgaagtaaaggcagctcatgttgaacttgctgaa
aggatgcgcaagcgagatgctgccactgctccaaatgttggagacagagtaccttatgta
attatcaaaggtgcaaaaggtgcgaaggcatatgagaaatcagaggaccctatttatgtt
ctagagaacaacataccaatagatgctcaatactatcttgagaatcaaattagcaagccg
atcctcagaatttttgagccaattctgaagaatgctagcagagaacttctccatggaagt
catacaagatctatttctatttctactccgtcaaatagtggcttatggaaatttactaag
aaagagcttacctgcattggctgtaaagctgtattagggaaggatcatcacaccgtctgt
tcacattgcaaaggaagggaagctgagctatattgtaaaacggtatctcgagtgtctgag
ctggagatgcattttgggaagttgtggacacagtgtcaggagtgccaaggttcacttcat
caagatattctctgcacaagtcgggattgtccaatcttttatcgacgaaagaaggcacag
aaagaaatgtctgaagcacaatcacaattggaccggtggagcttttaa
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