Vigna umbellata (ricebean): 124843124
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Entry
124843124 CDS
T09662
Name
(RefSeq) protein LATE ELONGATED HYPOCOTYL-like isoform X1
KO
K12133
MYB-related transcription factor LHY
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
124843124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vum03000
]
124843124
Transcription factors [BR:
vum03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
124843124
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
124843124
NCBI-ProteinID:
XP_047175725
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MDAYSSGEEVVIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFSKLEKEAFVKGVPVGQALDIDIPPPRPKRKPSNPYPRKINAAVAVPKNGKS
LLSFASSHGKLALDLEKEPLPEKHYQEDQMPTTVKENNDENSSKIFTILQEAAPASSVSL
PLRNPSPLREFIPSIKEVTTLDETNESFITDELQNHKLELDDGEHKQETNATCKVSKSEN
SGALKLVQTEKTDGMQGNQNYPRHVAVHVVDDKFNGQPKIVTNSAASNISESQNNTARSS
LHQSFSPCPPFLQHNQDDYHSFLHMSSTFSSLVVSTLLQNPAAHAAASFAATFWPYANAE
TSVDSPVCTPPSVTAITAATVAAATAWWAAHGLLPLCTPLHTAFACPPAPATAAPSMTLG
LSQHKNQQGEVKPENPPPEQSEVLQAQHSASKSPAVSSSESEKKGDTNVNTAPKATNDEM
NQAISENPDSDKINGRKPVDRSSCGSNTTSSSEETEILEKDEKEKEEPNKPDTNLLGSEP
NNRRSRSISNLTDSWKEVSEEGRLAFQALFSREVLPQSFSPPHDLINADNQIHSINKQNE
NYKDEDLETKKHSPICDGLQKSLSFVKDNDEEEGLLTMGLGQGKLKIRRTGFKPYKRCSV
EAKENMIGTACNQGEEKGPKRIRLNGEAST
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctactcctctggagaagaagtcgttattaagacacgaaaaccatatactatc
acaaagcaaagagaaagatggaccgaggaggaacataatagatttctggaagccttaaag
ctatacgggcgagcatggcagcgcatagaagagcacataggaacaaagactgctgtgcaa
atcagaagtcacgctcagaaattcttttcaaagttggagaaagaggcctttgtgaagggt
gttccagtaggacaagctcttgatatagacataccccctccaaggcctaaaagaaaacca
agcaatccttatcccaggaagatcaatgctgctgtcgctgtcccaaagaatggaaagtct
ctcctttcatttgcatcttcacatggtaaacttgcactggacttggagaaagaaccactt
ccagagaagcattatcaggaggaccaaatgccaacaactgtaaaagaaaataacgacgaa
aacagctcaaaaatatttaccattctccaggaagcagcacctgcctcatctgtatcactg
ccgctcagaaatccaagtcccttgagggagtttataccctcaataaaagaggtaacaact
ctagatgaaacaaatgagtcttttattactgatgagcttcaaaatcacaagttagagtta
gatgacggagagcacaaacaagagactaatgccacttgtaaagtctctaagtcggagaat
tctggtgctttgaaattggttcaaactgagaaaacagatgggatgcaaggaaatcagaat
tacccgagacatgtcgctgtgcacgttgttgacgacaagtttaatgggcaacctaagatt
gtcacaaactctgctgcatcaaacataagtgaaagtcaaaacaacacagcacggtcctct
cttcatcaatcgttttctccttgtcctcccttcttacaacacaatcaggatgattaccat
tcatttcttcatatgtcctccacgttttcaagtcttgttgtctctaccttgctgcaaaat
cctgctgcccatgctgctgcaagttttgctgctacattttggccctatgcaaatgcagaa
acttccgtagattctcccgtgtgcactcctcctagtgtgacagctattacagcagctaca
gttgctgccgcaactgcatggtgggctgcccatggtctgcttcctttgtgtactccactt
catactgcctttgcgtgtcctcctgcaccagcgactgcagctccatccatgactctcggt
ctatcacagcacaaaaaccaacaaggagaggttaagccagaaaatcctcctccagaacaa
tcggaagttctgcaagctcaacactcagcttccaagtcaccagctgtttcttcatcagaa
tctgagaagaagggagataccaatgtaaatactgcaccaaaggctactaatgatgagatg
aaccaagcgatttccgagaatcccgattccgacaaaataaacggtagaaaacctgtagac
cgttcctcgtgtggttctaacacaacctctagcagtgaagagactgagatactagagaag
gatgagaaagaaaaggaagagccaaacaaacctgatacaaaccttttaggttctgagcct
aataatcgccgtagtagaagcattagcaaccttactgattcttggaaggaggtctctgaa
gaggggcggcttgcctttcaggcgctattctccagggaggtgttgccacaaagcttttca
cctcctcatgatttgataaatgcagataatcagattcacagcatcaacaagcaaaacgaa
aactacaaagatgaagaccttgaaaccaaaaaacacagtcctatttgtgatgggctgcag
aaaagtttgtcatttgtcaaagataatgatgaagaggagggattgctaaccatgggtctt
ggacaaggaaagctgaagattcgtcgaacagggtttaaaccttacaaaaggtgttcggta
gaggcaaaggaaaacatgatcggaacggcctgcaaccaaggtgaagagaaaggtccaaag
agaatacgcttgaacggggaagcttcaacttga
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