Vigna umbellata (ricebean): 124843507
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Entry
124843507 CDS
T09662
Name
(RefSeq) tRNA (carboxymethyluridine(34)-5-O)-methyltransferase
KO
K10770
alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.-
2.1.1.229
]
Organism
vum
Vigna umbellata (ricebean)
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vum03016
]
124843507
Enzymes [BR:
vum01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
124843507
Transfer RNA biogenesis [BR:
vum03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
124843507
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_23
Methyltransf_12
Methyltransf_31
MetW
Ubie_methyltran
DUF2226
Methyltransf_9
Motif
Other DBs
NCBI-GeneID:
124843507
NCBI-ProteinID:
XP_047176223
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
MIHSVLKTSRFFNPRREALGLTSVIVDFVCHLAFSSMKQINCIGDSSLCTIAPSKEPSIT
DSLSVTGNGTTSSMSVQSTPEIEKKFVHHVYDAIAPHFSATRFAKWPKVASFLSSLPLGS
LVLDAGCGNGKYLGLNQDCFFIGCDISPSLIKICSDRGHEVLVADAVNLPYRTGFGDAAI
SIAVLHHLSTESRRRKAIEELVRVVKKGGHVLITVWAVEQEDTNLITKWTPLTEKYVEEW
VGPGSPRARTPSPLPLESIPESEESSTGENIKVCSESNVCKDLEEEKHIKNQQEYFVPWH
LPYHRAEISGASSHALAAGLATKDDKKGAVVYNRYYHVFSEGELESLTAGIINARIVDQF
FDKSNWCIILEKTA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgattcatagtgttctaaaaacaagtagattcttcaatccacgtagagaagcccttggt
ttgaccagtgtaattgttgattttgtttgtcatttagcatttagttcaatgaaacaaatc
aattgtataggggattctagtttgtgtactattgcccccagtaaggaaccctccattaca
gattccttatcagtcactgggaacggtactacttcatctatgagtgtacaatccacccct
gaaatagaaaagaagttcgttcatcatgtatatgatgctattgctccgcatttcagtgcc
actcggtttgccaaatggccgaaggttgcatcatttttgtcatctttgcctttggggtct
cttgtccttgatgcaggatgtgggaatgggaaatacctaggtttgaatcaggattgtttc
ttcataggatgtgatataagtccttccttgattaaaatctgctcggatagagggcatgaa
gttttggtggcagatgctgtgaatcttccttacagaactggttttggtgatgcagctata
tcaatagcagtgttacatcacttaagcactgaaagtagaaggagaaaagcaatagaagaa
ttggtcagagttgttaaaaagggtggccatgttctgattacagtttgggctgtagagcaa
gaggatacaaatctaattaccaaatggactccactgactgagaagtatgttgaagagtgg
gtaggaccagggagtcctcgtgctcggacaccctcacccttgccattagaaagcattcct
gagagtgaggagagtagcaccggtgagaacataaaagtttgcagtgagtcaaatgtatgt
aaagatttggaggaagaaaaacatataaagaaccaacaggaatactttgttccctggcat
ttaccttatcatcgtgctgaaatcagtggtgcttcttctcatgctcttgctgctggtctg
gcaactaaagatgacaaaaagggtgctgtggtgtataatcgatattatcatgtttttagt
gaaggagaacttgaaagtttgacagctggaataatcaatgctagaatcgttgatcagttt
tttgataaatccaactggtgtattattctcgagaaaacagcataa
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