Vigna umbellata (ricebean): 124843833
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Entry
124843833 CDS
T09662
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
vum
Vigna umbellata (ricebean)
Pathway
vum03082
ATP-dependent chromatin remodeling
vum03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
vum00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124843833
03083 Polycomb repressive complex
124843833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vum03036
]
124843833
Chromosome and associated proteins [BR:
vum03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
124843833
Histone modification proteins
HAT complexes
HATB complex
124843833
HDAC complexes
Sin3A-HDAC complex
124843833
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
124843833
PRC2.2
124843833
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
124843833
Heterochromatin formation proteins
Other heterochromatin formation proteins
124843833
Chromatin remodeling factors
NuRD complex
124843833
NuRF complex
124843833
NuRF complex (fruit fly)
124843833
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
eIF2A
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
124843833
NCBI-ProteinID:
XP_047176615
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MKEDKEKVEERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRHRLYLSEQ
TDGSVPNTLVIANCEVVKPRVAAAEHISQFNEESRSPFVKKFKTILHPGEVNRIREFPQK
SQIVATHTDSPEVFIWDVEAQPNRNAVLGAATSRPDLVLTGHKDNAEFALAMCPSEPFVL
SGGKDKCVVLWSVHDHISTLAVEEAPTIKQSSKSGGNNAKATESPTIGPRGIYQGHTDTV
EDVQFCPSSAQEFCSVGDDSRLILWDARVGSAPVVKVDKAHKGDLHCVDWSPHDSNFILT
GSADNTVHMFDRRNLKSSGVGSPVYKFEGHDAAVLCVQWSPDKSSVFGSAAEDGILNIWD
YEKVGKTTDSSGSKSPNAPSGLFFRHAGHRDKVVDFHWSACDPWTIVSVSDDCESSGGGG
TLQIWRMMDLIYRPEEEVLTELDKFRSHIFGCNS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggataaagagaaggtggaagagaggtacacgcagtggaagtctcttgttccc
gttctctacgattggctcgccaaccacaacctcgtatggccttctctttcttgcagatgg
ggtcctcaactggaacaagcaacctacaagaaccgtcaccgtctctatctctctgagcag
acagacggaagtgttcccaacactctcgttatagccaactgcgaggttgttaaacccagg
gttgctgctgctgagcacatctctcagtttaacgaagaatcacggtctccttttgtcaag
aagttcaaaactatactacatcctggcgaggtaaatagaatcagggaatttccacaaaaa
agtcagattgtagctactcacacagatagtcctgaggtatttatatgggatgttgaagct
cagcctaatcgtaatgctgttctgggggctgccacttctcgtcctgacctggtattaact
ggccataaggataatgctgaatttgctttggctatgtgcccatctgaaccctttgtactt
tctggagggaaggacaaatgtgtggttttatggagtgttcatgatcatatttcaacttta
gctgttgaagaagcacccactattaaacagagctctaaaagtgggggaaacaatgcaaaa
gctacagaaagccctactattggaccaaggggcatctaccagggtcatacggacactgtt
gaagatgttcaattttgcccatcaagtgcacaggagttctgtagtgtaggtgatgattct
cgtcttatactctgggatgcacgagttggatctgctccagttgtcaaggttgacaaagcg
cataagggagatcttcattgtgttgattggagtcctcatgactcaaattttatactaact
ggttctgcagataatacagtccatatgtttgatcgtcgaaatcttaaaagtagtggggtt
ggatcgcctgtttataaatttgaaggtcatgatgcagcagtcctctgtgtacagtggagt
cctgacaagtcatctgtatttggtagtgctgctgaagatggtattttaaacatctgggac
tatgaaaaggttggtaaaacaacagattcttctggttcaaaatcaccaaatgccccctct
ggtttattctttcgacatgctgggcatagggacaaggttgttgacttccactggagtgct
tgtgatccgtggacaattgttagtgtctctgatgattgtgaaagtagcggtggcggtggc
accttacagatatggcggatgatggatctcatatatcgaccagaggaggaggtgctcact
gagctggataagttcagatctcatatttttggatgcaactcatga
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